Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA3Q99618 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCA3Q99618 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA3Q99618 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA3Q99618 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.12■□□□□ 0.97
CDCA3Q99618 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA3Q99618 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA3Q99618 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA3Q99618 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA3Q99618 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA3Q99618 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.12■□□□□ 0.97
CDCA3Q99618 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA3Q99618 DUX4L26-201ENST00000489078 1255 ntBASIC21.12■□□□□ 0.97
CDCA3Q99618 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
CDCA3Q99618 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.12■□□□□ 0.97
CDCA3Q99618 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA3Q99618 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA3Q99618 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.12■□□□□ 0.97
CDCA3Q99618 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.12■□□□□ 0.97
CDCA3Q99618 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA3Q99618 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDCA3Q99618 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CDCA3Q99618 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA3Q99618 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA3Q99618 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CDCA3Q99618 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDCA3Q99618 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.11■□□□□ 0.97
CDCA3Q99618 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA3Q99618 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.11■□□□□ 0.97
CDCA3Q99618 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA3Q99618 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA3Q99618 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDCA3Q99618 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.11■□□□□ 0.97
CDCA3Q99618 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA3Q99618 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CDCA3Q99618 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA3Q99618 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA3Q99618 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.1■□□□□ 0.97
CDCA3Q99618 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA3Q99618 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA3Q99618 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA3Q99618 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CDCA3Q99618 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.1■□□□□ 0.97
CDCA3Q99618 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDCA3Q99618 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA3Q99618 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA3Q99618 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
CDCA3Q99618 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA3Q99618 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.1■□□□□ 0.97
CDCA3Q99618 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.1■□□□□ 0.97
CDCA3Q99618 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA3Q99618 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDCA3Q99618 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.1■□□□□ 0.97
CDCA3Q99618 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.1■□□□□ 0.97
CDCA3Q99618 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA3Q99618 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.1■□□□□ 0.97
CDCA3Q99618 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CDCA3Q99618 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDCA3Q99618 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.09■□□□□ 0.97
CDCA3Q99618 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDCA3Q99618 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.09■□□□□ 0.97
CDCA3Q99618 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDCA3Q99618 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.09■□□□□ 0.97
CDCA3Q99618 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.09■□□□□ 0.97
CDCA3Q99618 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.09■□□□□ 0.97
CDCA3Q99618 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.09■□□□□ 0.97
CDCA3Q99618 NTF6B-201ENST00000591913 560 ntBASIC21.09■□□□□ 0.97
CDCA3Q99618 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 AL031985.4-201ENST00000642138 673 ntBASIC21.09■□□□□ 0.97
CDCA3Q99618 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
CDCA3Q99618 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDCA3Q99618 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.09■□□□□ 0.97
CDCA3Q99618 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDCA3Q99618 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDCA3Q99618 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDCA3Q99618 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDCA3Q99618 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDCA3Q99618 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDCA3Q99618 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDCA3Q99618 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CDCA3Q99618 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CDCA3Q99618 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.08■□□□□ 0.97
CDCA3Q99618 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDCA3Q99618 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CDCA3Q99618 AC026271.3-201ENST00000571884 352 ntBASIC21.08■□□□□ 0.97
CDCA3Q99618 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.08■□□□□ 0.97
CDCA3Q99618 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDCA3Q99618 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.08■□□□□ 0.96
CDCA3Q99618 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.08■□□□□ 0.96
CDCA3Q99618 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDCA3Q99618 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms