Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCNX1Q96RV3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCNX1Q96RV3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCNX1Q96RV3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCNX1Q96RV3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCNX1Q96RV3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCNX1Q96RV3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCNX1Q96RV3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.83■□□□□ 0.45
PCNX1Q96RV3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.83■□□□□ 0.45
PCNX1Q96RV3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.83■□□□□ 0.45
PCNX1Q96RV3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.83■□□□□ 0.45
PCNX1Q96RV3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.83■□□□□ 0.45
PCNX1Q96RV3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.83■□□□□ 0.45
PCNX1Q96RV3 AL121829.2-201ENST00000620908 328 ntBASIC17.83■□□□□ 0.45
PCNX1Q96RV3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCNX1Q96RV3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNX1Q96RV3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCNX1Q96RV3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.83■□□□□ 0.44
PCNX1Q96RV3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCNX1Q96RV3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNX1Q96RV3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCNX1Q96RV3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.83■□□□□ 0.44
PCNX1Q96RV3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.83■□□□□ 0.44
PCNX1Q96RV3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 GUSBP5-202ENST00000510805 1989 ntBASIC17.82■□□□□ 0.44
PCNX1Q96RV3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 AL031963.3-201ENST00000606441 850 ntBASIC17.82■□□□□ 0.44
PCNX1Q96RV3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCNX1Q96RV3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 AL390719.1-204ENST00000412397 1219 ntBASIC17.81■□□□□ 0.44
PCNX1Q96RV3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 NTF6B-201ENST00000591913 560 ntBASIC17.81■□□□□ 0.44
PCNX1Q96RV3 AC145285.6-201ENST00000604632 637 ntBASIC17.81■□□□□ 0.44
PCNX1Q96RV3 AL121906.2-201ENST00000621597 723 ntBASIC17.81■□□□□ 0.44
PCNX1Q96RV3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCNX1Q96RV3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 AL355355.2-201ENST00000442321 338 ntBASIC17.8■□□□□ 0.44
PCNX1Q96RV3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PCNX1Q96RV3 AC116562.2-201ENST00000507042 360 ntBASIC17.8■□□□□ 0.44
PCNX1Q96RV3 AC026471.5-201ENST00000615068 467 ntBASIC17.8■□□□□ 0.44
PCNX1Q96RV3 AC079598.2-202ENST00000546624 1451 ntBASIC17.8■□□□□ 0.44
PCNX1Q96RV3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.79■□□□□ 0.44
PCNX1Q96RV3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCNX1Q96RV3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms