Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC005332.8-201ENST00000622750 2735 ntBASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB3IPQ96QF0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 TREX1-205ENST00000625293 1783 ntBASIC19.65■□□□□ 0.74
RAB3IPQ96QF0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB3IPQ96QF0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAB3IPQ96QF0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.64■□□□□ 0.74
RAB3IPQ96QF0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAB3IPQ96QF0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB3IPQ96QF0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB3IPQ96QF0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 MIR4508-201ENST00000584178 70 ntBASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 AC137630.3-201ENST00000607245 391 ntBASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 BX005040.4-201ENST00000637145 1518 ntBASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB3IPQ96QF0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 AC020916.1-201ENST00000587762 1774 ntBASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB3IPQ96QF0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB3IPQ96QF0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms