Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.71■□□□□ 0.91
IFT43Q96FT9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.71■□□□□ 0.91
IFT43Q96FT9 AC016405.3-201ENST00000607710 860 ntBASIC20.71■□□□□ 0.91
IFT43Q96FT9 AC092118.2-201ENST00000613495 667 ntBASIC20.71■□□□□ 0.91
IFT43Q96FT9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
IFT43Q96FT9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.71■□□□□ 0.91
IFT43Q96FT9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
IFT43Q96FT9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
IFT43Q96FT9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
IFT43Q96FT9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.7■□□□□ 0.9
IFT43Q96FT9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFT43Q96FT9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
IFT43Q96FT9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.7■□□□□ 0.9
IFT43Q96FT9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
IFT43Q96FT9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFT43Q96FT9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.7■□□□□ 0.9
IFT43Q96FT9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFT43Q96FT9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFT43Q96FT9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
IFT43Q96FT9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.7■□□□□ 0.9
IFT43Q96FT9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.7■□□□□ 0.9
IFT43Q96FT9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IFT43Q96FT9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.69■□□□□ 0.9
IFT43Q96FT9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFT43Q96FT9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFT43Q96FT9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
IFT43Q96FT9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IFT43Q96FT9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.69■□□□□ 0.9
IFT43Q96FT9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IFT43Q96FT9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFT43Q96FT9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFT43Q96FT9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
IFT43Q96FT9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
IFT43Q96FT9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
IFT43Q96FT9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IFT43Q96FT9 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.69■□□□□ 0.9
IFT43Q96FT9 TSPY20P-201ENST00000450910 630 ntBASIC20.69■□□□□ 0.9
IFT43Q96FT9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
IFT43Q96FT9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.69■□□□□ 0.9
IFT43Q96FT9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
IFT43Q96FT9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IFT43Q96FT9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.69■□□□□ 0.9
IFT43Q96FT9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFT43Q96FT9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFT43Q96FT9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
IFT43Q96FT9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFT43Q96FT9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.68■□□□□ 0.9
IFT43Q96FT9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFT43Q96FT9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
IFT43Q96FT9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFT43Q96FT9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFT43Q96FT9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IFT43Q96FT9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.68■□□□□ 0.9
IFT43Q96FT9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.68■□□□□ 0.9
IFT43Q96FT9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.68■□□□□ 0.9
IFT43Q96FT9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.68■□□□□ 0.9
IFT43Q96FT9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IFT43Q96FT9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IFT43Q96FT9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IFT43Q96FT9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
IFT43Q96FT9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
IFT43Q96FT9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.67■□□□□ 0.9
IFT43Q96FT9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
IFT43Q96FT9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 RARRES2P4-201ENST00000514074 484 ntBASIC20.67■□□□□ 0.9
IFT43Q96FT9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.67■□□□□ 0.9
IFT43Q96FT9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.67■□□□□ 0.9
IFT43Q96FT9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 MIR2861-201ENST00000636310 90 ntBASIC20.67■□□□□ 0.9
IFT43Q96FT9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.67■□□□□ 0.9
IFT43Q96FT9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.67■□□□□ 0.9
IFT43Q96FT9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IFT43Q96FT9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 AC093787.1-201ENST00000450396 207 ntBASIC20.66■□□□□ 0.9
IFT43Q96FT9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 AC098934.4-201ENST00000564127 592 ntBASIC20.66■□□□□ 0.9
IFT43Q96FT9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
IFT43Q96FT9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.66■□□□□ 0.9
IFT43Q96FT9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms