Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3KBP1Q96B97 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 PLK5-205ENST00000642079 1969 ntBASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3KBP1Q96B97 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 ITM2C-210ENST00000620962 501 ntBASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 AC105020.6-201ENST00000621523 1217 ntBASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 HLA-B-256ENST00000639848 1089 ntBASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SH3KBP1Q96B97 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 KRT18P29-201ENST00000397031 1267 ntBASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 AC060766.5-201ENST00000590539 871 ntBASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 AC087633.2-202ENST00000565166 1439 ntBASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SH3KBP1Q96B97 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SH3KBP1Q96B97 AC138932.1-201ENST00000534164 6830 ntBASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms