Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC25.97■■□□□ 1.75
ZNF428Q96B54 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
ZNF428Q96B54 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZNF428Q96B54 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZNF428Q96B54 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.96■■□□□ 1.75
ZNF428Q96B54 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZNF428Q96B54 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.96■■□□□ 1.75
ZNF428Q96B54 PTBP1P-201ENST00000554374 1601 ntBASIC25.96■■□□□ 1.75
ZNF428Q96B54 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZNF428Q96B54 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.96■■□□□ 1.75
ZNF428Q96B54 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC25.96■■□□□ 1.75
ZNF428Q96B54 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZNF428Q96B54 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZNF428Q96B54 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
ZNF428Q96B54 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC25.96■■□□□ 1.75
ZNF428Q96B54 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.96■■□□□ 1.75
ZNF428Q96B54 AC233263.1-201ENST00000578059 224 ntBASIC25.96■■□□□ 1.75
ZNF428Q96B54 AC008403.3-201ENST00000598924 454 ntBASIC25.96■■□□□ 1.75
ZNF428Q96B54 AC073648.6-201ENST00000641589 218 ntBASIC25.96■■□□□ 1.75
ZNF428Q96B54 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZNF428Q96B54 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZNF428Q96B54 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.96■■□□□ 1.75
ZNF428Q96B54 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
ZNF428Q96B54 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
ZNF428Q96B54 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
ZNF428Q96B54 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.95■■□□□ 1.74
ZNF428Q96B54 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC25.95■■□□□ 1.74
ZNF428Q96B54 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.95■■□□□ 1.74
ZNF428Q96B54 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.95■■□□□ 1.74
ZNF428Q96B54 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.95■■□□□ 1.74
ZNF428Q96B54 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ZNF428Q96B54 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.95■■□□□ 1.74
ZNF428Q96B54 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
ZNF428Q96B54 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.95■■□□□ 1.74
ZNF428Q96B54 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZNF428Q96B54 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZNF428Q96B54 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZNF428Q96B54 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.94■■□□□ 1.74
ZNF428Q96B54 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.94■■□□□ 1.74
ZNF428Q96B54 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.94■■□□□ 1.74
ZNF428Q96B54 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.94■■□□□ 1.74
ZNF428Q96B54 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZNF428Q96B54 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZNF428Q96B54 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ZNF428Q96B54 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
ZNF428Q96B54 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
ZNF428Q96B54 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
ZNF428Q96B54 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ZNF428Q96B54 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZNF428Q96B54 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZNF428Q96B54 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
ZNF428Q96B54 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.93■■□□□ 1.74
ZNF428Q96B54 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.93■■□□□ 1.74
ZNF428Q96B54 AP003097.1-201ENST00000530657 1135 ntBASIC25.93■■□□□ 1.74
ZNF428Q96B54 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.93■■□□□ 1.74
ZNF428Q96B54 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZNF428Q96B54 AL512408.1-201ENST00000569378 2000 ntBASIC25.93■■□□□ 1.74
ZNF428Q96B54 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
ZNF428Q96B54 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZNF428Q96B54 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
ZNF428Q96B54 DPP3P2-201ENST00000416030 1696 ntBASIC25.93■■□□□ 1.74
ZNF428Q96B54 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
ZNF428Q96B54 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.92■■□□□ 1.74
ZNF428Q96B54 AC026366.1-201ENST00000488803 879 ntBASIC25.92■■□□□ 1.74
ZNF428Q96B54 AC023632.3-201ENST00000521633 145 ntBASIC25.92■■□□□ 1.74
ZNF428Q96B54 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
ZNF428Q96B54 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
ZNF428Q96B54 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.92■■□□□ 1.74
ZNF428Q96B54 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
ZNF428Q96B54 AC092667.1-201ENST00000434301 2586 ntBASIC25.92■■□□□ 1.74
ZNF428Q96B54 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.92■■□□□ 1.74
ZNF428Q96B54 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.92■■□□□ 1.74
ZNF428Q96B54 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
ZNF428Q96B54 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC25.91■■□□□ 1.74
ZNF428Q96B54 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC25.91■■□□□ 1.74
ZNF428Q96B54 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
ZNF428Q96B54 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZNF428Q96B54 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
ZNF428Q96B54 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZNF428Q96B54 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.91■■□□□ 1.74
ZNF428Q96B54 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.91■■□□□ 1.74
ZNF428Q96B54 GCSHP5-201ENST00000443090 522 ntBASIC25.91■■□□□ 1.74
ZNF428Q96B54 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ZNF428Q96B54 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC25.91■■□□□ 1.74
ZNF428Q96B54 H19-201ENST00000411754 1788 ntTSL 5 BASIC25.91■■□□□ 1.74
ZNF428Q96B54 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ZNF428Q96B54 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.91■■□□□ 1.74
ZNF428Q96B54 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ZNF428Q96B54 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms