Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCG3Q8WXD2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCG3Q8WXD2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SCG3Q8WXD2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SCG3Q8WXD2 KRT18P6-201ENST00000555540 1265 ntBASIC20.58■□□□□ 0.89
SCG3Q8WXD2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.58■□□□□ 0.89
SCG3Q8WXD2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.58■□□□□ 0.89
SCG3Q8WXD2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.58■□□□□ 0.89
SCG3Q8WXD2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCG3Q8WXD2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
SCG3Q8WXD2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SCG3Q8WXD2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.58■□□□□ 0.88
SCG3Q8WXD2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.58■□□□□ 0.88
SCG3Q8WXD2 MKRN4P-201ENST00000444706 1521 ntBASIC20.58■□□□□ 0.88
SCG3Q8WXD2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 AL591742.1-201ENST00000604433 565 ntBASIC20.57■□□□□ 0.88
SCG3Q8WXD2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SCG3Q8WXD2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 AL512625.2-201ENST00000417533 625 ntBASIC20.56■□□□□ 0.88
SCG3Q8WXD2 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.56■□□□□ 0.88
SCG3Q8WXD2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCG3Q8WXD2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 AL162412.1-201ENST00000567129 965 ntBASIC20.55■□□□□ 0.88
SCG3Q8WXD2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.55■□□□□ 0.88
SCG3Q8WXD2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 ABHD17AP1-201ENST00000358206 933 ntBASIC20.54■□□□□ 0.88
SCG3Q8WXD2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 AL020996.1-203ENST00000536896 2307 ntBASIC20.54■□□□□ 0.88
SCG3Q8WXD2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCG3Q8WXD2 GABARAPL3-202ENST00000624044 1851 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms