Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SETD9Q8NE22 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SETD9Q8NE22 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.49■□□□□ 0.55
SETD9Q8NE22 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SETD9Q8NE22 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.49■□□□□ 0.55
SETD9Q8NE22 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SETD9Q8NE22 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SETD9Q8NE22 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.49■□□□□ 0.55
SETD9Q8NE22 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 TREX1-205ENST00000625293 1783 ntBASIC18.48■□□□□ 0.55
SETD9Q8NE22 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 AC005224.4-201ENST00000583262 1652 ntBASIC18.48■□□□□ 0.55
SETD9Q8NE22 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SETD9Q8NE22 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SETD9Q8NE22 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 AC093503.3-201ENST00000624917 2352 ntBASIC18.47■□□□□ 0.55
SETD9Q8NE22 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 AL691432.2-201ENST00000607222 2038 ntBASIC18.47■□□□□ 0.55
SETD9Q8NE22 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.47■□□□□ 0.55
SETD9Q8NE22 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SETD9Q8NE22 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SETD9Q8NE22 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SETD9Q8NE22 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
SETD9Q8NE22 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.46■□□□□ 0.55
SETD9Q8NE22 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.55
SETD9Q8NE22 MIR3621-201ENST00000580529 85 ntBASIC18.46■□□□□ 0.55
SETD9Q8NE22 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SETD9Q8NE22 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.46■□□□□ 0.55
SETD9Q8NE22 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SETD9Q8NE22 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.46■□□□□ 0.55
SETD9Q8NE22 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SETD9Q8NE22 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SETD9Q8NE22 AC061975.6-201ENST00000579045 1553 ntBASIC18.46■□□□□ 0.55
SETD9Q8NE22 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SETD9Q8NE22 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SETD9Q8NE22 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
SETD9Q8NE22 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SETD9Q8NE22 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.45■□□□□ 0.54
SETD9Q8NE22 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.45■□□□□ 0.54
SETD9Q8NE22 AC053503.5-201ENST00000601508 636 ntBASIC18.45■□□□□ 0.54
SETD9Q8NE22 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
SETD9Q8NE22 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SETD9Q8NE22 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.45■□□□□ 0.54
SETD9Q8NE22 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SETD9Q8NE22 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
SETD9Q8NE22 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SETD9Q8NE22 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms