Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.67■□□□□ 0.26
COMMD1Q8N668 AL162377.1-201ENST00000618844 1793 ntBASIC16.67■□□□□ 0.26
COMMD1Q8N668 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COMMD1Q8N668 AP000974.1-201ENST00000623909 2387 ntBASIC16.67■□□□□ 0.26
COMMD1Q8N668 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.67■□□□□ 0.26
COMMD1Q8N668 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
COMMD1Q8N668 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 AC026471.6-201ENST00000622954 1905 ntBASIC16.66■□□□□ 0.26
COMMD1Q8N668 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 IKBKGP1-201ENST00000612193 1073 ntBASIC16.66■□□□□ 0.26
COMMD1Q8N668 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.66■□□□□ 0.26
COMMD1Q8N668 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COMMD1Q8N668 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 AC104187.1-201ENST00000607510 612 ntBASIC16.65■□□□□ 0.26
COMMD1Q8N668 AC092437.1-201ENST00000624794 1048 ntBASIC16.65■□□□□ 0.26
COMMD1Q8N668 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.65■□□□□ 0.26
COMMD1Q8N668 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COMMD1Q8N668 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
COMMD1Q8N668 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
COMMD1Q8N668 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD1Q8N668 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
COMMD1Q8N668 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COMMD1Q8N668 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.64■□□□□ 0.25
COMMD1Q8N668 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COMMD1Q8N668 AC004911.1-201ENST00000416316 871 ntBASIC16.64■□□□□ 0.25
COMMD1Q8N668 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COMMD1Q8N668 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.64■□□□□ 0.25
COMMD1Q8N668 KRT18P20-201ENST00000548986 1279 ntBASIC16.64■□□□□ 0.25
COMMD1Q8N668 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.64■□□□□ 0.25
COMMD1Q8N668 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms