Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 AC068338.2-201ENST00000563278 1430 ntBASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 BID-214ENST00000617586 542 ntTSL 5 BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 AC100791.3-201ENST00000617619 330 ntBASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 MCRIP2P1-201ENST00000394346 511 ntBASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDKL3Q8IVW4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CDKL3Q8IVW4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDKL3Q8IVW4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.71■□□□□ 0.91
CDKL3Q8IVW4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL3Q8IVW4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.71■□□□□ 0.91
CDKL3Q8IVW4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL3Q8IVW4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL3Q8IVW4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDKL3Q8IVW4 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.71■□□□□ 0.91
CDKL3Q8IVW4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CDKL3Q8IVW4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.7■□□□□ 0.91
CDKL3Q8IVW4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 CYP2T1P-201ENST00000432607 1285 ntBASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDKL3Q8IVW4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 BX119927.1-201ENST00000636596 1552 ntBASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 AC069236.1-201ENST00000604339 616 ntBASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 AC231657.2-201ENST00000624556 255 ntBASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.69■□□□□ 0.9
CDKL3Q8IVW4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKL3Q8IVW4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms