Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC25.54■■□□□ 1.68
COL23A1Q86Y22 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL23A1Q86Y22 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 CRYGFP-201ENST00000418459 633 ntBASIC25.53■■□□□ 1.68
COL23A1Q86Y22 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.53■■□□□ 1.68
COL23A1Q86Y22 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL23A1Q86Y22 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
COL23A1Q86Y22 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 INGX-201ENST00000359239 846 ntBASIC25.51■■□□□ 1.67
COL23A1Q86Y22 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 EGLN1P1-201ENST00000531623 762 ntBASIC25.51■■□□□ 1.67
COL23A1Q86Y22 MYC-208ENST00000641036 567 ntBASIC25.51■■□□□ 1.67
COL23A1Q86Y22 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.51■■□□□ 1.67
COL23A1Q86Y22 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 TSPY14P-201ENST00000303979 915 ntBASIC25.5■■□□□ 1.67
COL23A1Q86Y22 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 C2orf69P3-201ENST00000565542 1120 ntBASIC25.5■■□□□ 1.67
COL23A1Q86Y22 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL23A1Q86Y22 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL23A1Q86Y22 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL23A1Q86Y22 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL23A1Q86Y22 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC25.49■■□□□ 1.67
COL23A1Q86Y22 BX664615.1-201ENST00000443558 458 ntBASIC25.49■■□□□ 1.67
COL23A1Q86Y22 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC25.49■■□□□ 1.67
COL23A1Q86Y22 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC25.49■■□□□ 1.67
COL23A1Q86Y22 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL23A1Q86Y22 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL23A1Q86Y22 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL23A1Q86Y22 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 AL031133.1-201ENST00000406807 723 ntBASIC25.48■■□□□ 1.67
COL23A1Q86Y22 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL23A1Q86Y22 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
COL23A1Q86Y22 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms