Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
LINC00242Q5T6M2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
LINC00242Q5T6M2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
LINC00242Q5T6M2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 AC138907.5-202ENST00000569484 235 ntBASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC00242Q5T6M2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 AC093484.2-201ENST00000580996 2166 ntBASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 BX119927.1-201ENST00000636596 1552 ntBASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 KRT8P36-201ENST00000489121 1440 ntBASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 AC079140.4-201ENST00000507448 529 ntBASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC00242Q5T6M2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 AC004408.2-201ENST00000623613 2777 ntBASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 AP001330.3-201ENST00000520123 633 ntBASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC00242Q5T6M2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC00242Q5T6M2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms