Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.58■■□□□ 1.53
TTC39AQ5SRH9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TTC39AQ5SRH9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.58■■□□□ 1.53
TTC39AQ5SRH9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TTC39AQ5SRH9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
TTC39AQ5SRH9 AC092720.2-201ENST00000602388 1665 ntBASIC24.58■■□□□ 1.53
TTC39AQ5SRH9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TTC39AQ5SRH9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.58■■□□□ 1.53
TTC39AQ5SRH9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
TTC39AQ5SRH9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.52
TTC39AQ5SRH9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TTC39AQ5SRH9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
TTC39AQ5SRH9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.58■■□□□ 1.52
TTC39AQ5SRH9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 AC023632.3-201ENST00000521633 145 ntBASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 AC008687.6-201ENST00000596318 630 ntBASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 AC073648.6-201ENST00000641589 218 ntBASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TTC39AQ5SRH9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 DPP3P2-201ENST00000416030 1696 ntBASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 PRORSD1P-201ENST00000295112 541 ntBASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TTC39AQ5SRH9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 PTBP1P-201ENST00000554374 1601 ntBASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.55■■□□□ 1.52
TTC39AQ5SRH9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 KRT17P3-201ENST00000420566 1262 ntBASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TTC39AQ5SRH9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39AQ5SRH9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39AQ5SRH9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39AQ5SRH9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39AQ5SRH9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39AQ5SRH9 POM121L13P-201ENST00000422362 380 ntBASIC24.53■■□□□ 1.52
TTC39AQ5SRH9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.53■■□□□ 1.52
TTC39AQ5SRH9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.53■■□□□ 1.52
TTC39AQ5SRH9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TTC39AQ5SRH9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
TTC39AQ5SRH9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TTC39AQ5SRH9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms