Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.72■□□□□ 0.43
NKX6-1P78426 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-1P78426 AL049796.1-201ENST00000565336 1766 ntBASIC17.72■□□□□ 0.43
NKX6-1P78426 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-1P78426 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-1P78426 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-1P78426 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-1P78426 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NKX6-1P78426 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX6-1P78426 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.72■□□□□ 0.43
NKX6-1P78426 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX6-1P78426 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.72■□□□□ 0.43
NKX6-1P78426 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.72■□□□□ 0.43
NKX6-1P78426 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX6-1P78426 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.72■□□□□ 0.43
NKX6-1P78426 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-1P78426 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
NKX6-1P78426 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.72■□□□□ 0.43
NKX6-1P78426 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-1P78426 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
NKX6-1P78426 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-1P78426 FEM1AP4-201ENST00000443167 1987 ntBASIC17.71■□□□□ 0.43
NKX6-1P78426 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NKX6-1P78426 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.71■□□□□ 0.43
NKX6-1P78426 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.71■□□□□ 0.43
NKX6-1P78426 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NKX6-1P78426 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 MCRIP2P1-201ENST00000394346 511 ntBASIC17.71■□□□□ 0.43
NKX6-1P78426 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX6-1P78426 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX6-1P78426 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.71■□□□□ 0.43
NKX6-1P78426 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX6-1P78426 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.71■□□□□ 0.43
NKX6-1P78426 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NKX6-1P78426 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
NKX6-1P78426 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-1P78426 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NKX6-1P78426 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NKX6-1P78426 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.7■□□□□ 0.42
NKX6-1P78426 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 ECEL1P3-201ENST00000427961 737 ntBASIC17.7■□□□□ 0.42
NKX6-1P78426 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NKX6-1P78426 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX6-1P78426 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.7■□□□□ 0.42
NKX6-1P78426 MIR4497-201ENST00000583208 89 ntBASIC17.7■□□□□ 0.42
NKX6-1P78426 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.7■□□□□ 0.42
NKX6-1P78426 CYP2T3P-201ENST00000601990 817 ntBASIC17.7■□□□□ 0.42
NKX6-1P78426 AC073912.3-201ENST00000624414 853 ntBASIC17.7■□□□□ 0.42
NKX6-1P78426 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.7■□□□□ 0.42
NKX6-1P78426 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 AC011484.1-201ENST00000377652 1995 ntBASIC17.7■□□□□ 0.42
NKX6-1P78426 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-1P78426 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
NKX6-1P78426 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-1P78426 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.69■□□□□ 0.42
NKX6-1P78426 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-1P78426 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-1P78426 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.69■□□□□ 0.42
NKX6-1P78426 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-1P78426 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-1P78426 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-1P78426 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NKX6-1P78426 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.69■□□□□ 0.42
NKX6-1P78426 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-1P78426 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-1P78426 AL355472.2-201ENST00000422958 438 ntBASIC17.69■□□□□ 0.42
NKX6-1P78426 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-1P78426 RPPH1-201ENST00000516869 333 ntBASIC17.69■□□□□ 0.42
NKX6-1P78426 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-1P78426 C1QBPP2-201ENST00000528754 825 ntBASIC17.69■□□□□ 0.42
NKX6-1P78426 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-1P78426 AC060766.5-201ENST00000590539 871 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms