Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SIRPAP78324 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SIRPAP78324 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SIRPAP78324 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPAP78324 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPAP78324 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.35■□□□□ 0.53
SIRPAP78324 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPAP78324 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPAP78324 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.35■□□□□ 0.53
SIRPAP78324 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SIRPAP78324 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.35■□□□□ 0.53
SIRPAP78324 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPAP78324 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.35■□□□□ 0.53
SIRPAP78324 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPAP78324 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.35■□□□□ 0.53
SIRPAP78324 FAM21FP-204ENST00000608637 956 ntBASIC18.35■□□□□ 0.53
SIRPAP78324 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SIRPAP78324 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.35■□□□□ 0.53
SIRPAP78324 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.35■□□□□ 0.53
SIRPAP78324 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPAP78324 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.35■□□□□ 0.53
SIRPAP78324 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SIRPAP78324 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPAP78324 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SIRPAP78324 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SIRPAP78324 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPAP78324 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPAP78324 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.35■□□□□ 0.53
SIRPAP78324 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPAP78324 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPAP78324 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIRPAP78324 PCDHAC2-203ENST00000615316 3011 ntBASIC18.34■□□□□ 0.53
SIRPAP78324 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.34■□□□□ 0.53
SIRPAP78324 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
SIRPAP78324 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPAP78324 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.34■□□□□ 0.53
SIRPAP78324 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPAP78324 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIRPAP78324 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPAP78324 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIRPAP78324 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.34■□□□□ 0.53
SIRPAP78324 LSM12P1-201ENST00000411836 588 ntBASIC18.34■□□□□ 0.53
SIRPAP78324 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SIRPAP78324 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.34■□□□□ 0.53
SIRPAP78324 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.34■□□□□ 0.53
SIRPAP78324 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.34■□□□□ 0.53
SIRPAP78324 AC092118.2-201ENST00000613495 667 ntBASIC18.34■□□□□ 0.53
SIRPAP78324 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPAP78324 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.34■□□□□ 0.53
SIRPAP78324 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPAP78324 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.34■□□□□ 0.53
SIRPAP78324 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.34■□□□□ 0.53
SIRPAP78324 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPAP78324 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.34■□□□□ 0.53
SIRPAP78324 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPAP78324 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SIRPAP78324 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SIRPAP78324 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPAP78324 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SIRPAP78324 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.33■□□□□ 0.53
SIRPAP78324 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.33■□□□□ 0.53
SIRPAP78324 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SIRPAP78324 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SIRPAP78324 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIRPAP78324 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SIRPAP78324 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SIRPAP78324 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIRPAP78324 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.33■□□□□ 0.53
SIRPAP78324 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIRPAP78324 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.33■□□□□ 0.52
SIRPAP78324 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIRPAP78324 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
SIRPAP78324 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.33■□□□□ 0.52
SIRPAP78324 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIRPAP78324 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.33■□□□□ 0.52
SIRPAP78324 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SIRPAP78324 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SIRPAP78324 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
SIRPAP78324 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.32■□□□□ 0.52
SIRPAP78324 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 AC073210.2-201ENST00000430369 194 ntBASIC18.32■□□□□ 0.52
SIRPAP78324 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.32■□□□□ 0.52
SIRPAP78324 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.32■□□□□ 0.52
SIRPAP78324 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.32■□□□□ 0.52
SIRPAP78324 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.32■□□□□ 0.52
SIRPAP78324 RNA5SP413-201ENST00000516373 109 ntBASIC18.32■□□□□ 0.52
SIRPAP78324 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.32■□□□□ 0.52
SIRPAP78324 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.32■□□□□ 0.52
SIRPAP78324 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.32■□□□□ 0.52
SIRPAP78324 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SIRPAP78324 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.32■□□□□ 0.52
SIRPAP78324 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SIRPAP78324 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms