Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDH6P55285 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDH6P55285 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH6P55285 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH6P55285 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH6P55285 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH6P55285 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH6P55285 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH6P55285 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH6P55285 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH6P55285 AC073111.5-205ENST00000641717 521 ntBASIC20.99■□□□□ 0.95
CDH6P55285 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.99■□□□□ 0.95
CDH6P55285 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH6P55285 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH6P55285 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH6P55285 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH6P55285 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.99■□□□□ 0.95
CDH6P55285 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDH6P55285 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CDH6P55285 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDH6P55285 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH6P55285 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.98■□□□□ 0.95
CDH6P55285 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH6P55285 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH6P55285 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH6P55285 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 AC005181.1-201ENST00000604782 1256 ntBASIC20.98■□□□□ 0.95
CDH6P55285 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CDH6P55285 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH6P55285 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.98■□□□□ 0.95
CDH6P55285 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH6P55285 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.98■□□□□ 0.95
CDH6P55285 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDH6P55285 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDH6P55285 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH6P55285 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.97■□□□□ 0.95
CDH6P55285 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH6P55285 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH6P55285 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH6P55285 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH6P55285 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.97■□□□□ 0.95
CDH6P55285 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH6P55285 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH6P55285 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH6P55285 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDH6P55285 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDH6P55285 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH6P55285 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CDH6P55285 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH6P55285 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH6P55285 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH6P55285 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH6P55285 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH6P55285 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH6P55285 KRT18P68-201ENST00000392293 1000 ntBASIC20.96■□□□□ 0.95
CDH6P55285 AL355472.2-201ENST00000422958 438 ntBASIC20.96■□□□□ 0.95
CDH6P55285 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CDH6P55285 CDCA4P2-201ENST00000441182 718 ntBASIC20.96■□□□□ 0.95
CDH6P55285 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH6P55285 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.96■□□□□ 0.95
CDH6P55285 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CDH6P55285 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.96■□□□□ 0.95
CDH6P55285 CYP2T3P-201ENST00000601990 817 ntBASIC20.96■□□□□ 0.95
CDH6P55285 OR10C1-204ENST00000622521 1039 ntBASIC20.96■□□□□ 0.95
CDH6P55285 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CDH6P55285 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH6P55285 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH6P55285 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH6P55285 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH6P55285 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH6P55285 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH6P55285 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH6P55285 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH6P55285 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDH6P55285 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH6P55285 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.95■□□□□ 0.94
CDH6P55285 AC105020.6-201ENST00000621523 1217 ntBASIC20.95■□□□□ 0.94
CDH6P55285 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH6P55285 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH6P55285 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDH6P55285 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH6P55285 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH6P55285 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.95■□□□□ 0.94
CDH6P55285 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH6P55285 AC010980.2-201ENST00000587099 1412 ntBASIC20.95■□□□□ 0.94
CDH6P55285 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH6P55285 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.94■□□□□ 0.94
CDH6P55285 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms