Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 YIL059CYIL059C 366 nt1.7□□□□□ -2.14
CAF40P53829 MMS22YLR320W 4365 nt1.7□□□□□ -2.14
CAF40P53829 SWI5YDR146C 2130 nt1.69□□□□□ -2.14
CAF40P53829 HER1YOR227W 3741 nt1.69□□□□□ -2.14
CAF40P53829 YCR087C-AYCR087C-A 462 nt1.69□□□□□ -2.14
CAF40P53829 MAM33YIL070C 801 nt1.69□□□□□ -2.14
CAF40P53829 YLR146W-AYLR146W-A 189 nt1.69□□□□□ -2.14
CAF40P53829 TMA7YLR262C-A 195 nt1.69□□□□□ -2.14
CAF40P53829 YMR031W-AYMR031W-A 327 nt1.69□□□□□ -2.14
CAF40P53829 MGA2YIR033W 3342 nt1.69□□□□□ -2.14
CAF40P53829 RTP1YMR185W 2946 nt1.69□□□□□ -2.14
CAF40P53829 SSQ1YLR369W 1974 nt1.68□□□□□ -2.14
CAF40P53829 YDR183C-AYDR183C-A 258 nt1.68□□□□□ -2.14
CAF40P53829 YPR010C-AYPR010C-A 219 nt1.68□□□□□ -2.14
CAF40P53829 HDA3YPR179C 1968 nt1.68□□□□□ -2.14
CAF40P53829 NAM7YMR080C 2916 nt1.68□□□□□ -2.14
CAF40P53829 APL5YPL195W 2799 nt1.68□□□□□ -2.14
CAF40P53829 TAR1YLR154W-C 375 nt1.67□□□□□ -2.14
CAF40P53829 YOR231C-AYOR231C-A 201 nt1.67□□□□□ -2.14
CAF40P53829 HIR3YJR140C 4947 nt1.67□□□□□ -2.14
CAF40P53829 YLR419WYLR419W 4308 nt1.67□□□□□ -2.14
CAF40P53829 HCS1YKL017C 2052 nt1.67□□□□□ -2.14
CAF40P53829 EFR3YMR212C 2349 nt1.66□□□□□ -2.14
CAF40P53829 YDR169C-AYDR169C-A 150 nt1.66□□□□□ -2.14
CAF40P53829 YER088C-AYER088C-A 324 nt1.66□□□□□ -2.14
CAF40P53829 YER181CYER181C 324 nt1.66□□□□□ -2.14
CAF40P53829 YFL063WYFL063W 456 nt1.66□□□□□ -2.14
CAF40P53829 HTB2YBL002W 396 nt1.66□□□□□ -2.14
CAF40P53829 STE5YDR103W 2754 nt1.66□□□□□ -2.14
CAF40P53829 YDR003W-AYDR003W-A 123 nt1.65□□□□□ -2.15
CAF40P53829 YER172C-AYER172C-A 381 nt1.65□□□□□ -2.15
CAF40P53829 snR43snR43 209 nt1.65□□□□□ -2.15
CAF40P53829 PET309YLR067C 2898 nt1.65□□□□□ -2.15
CAF40P53829 LYS14YDR034C 2373 nt1.64□□□□□ -2.15
CAF40P53829 MSC6YOR354C 2079 nt1.64□□□□□ -2.15
CAF40P53829 YDR048CYDR048C 315 nt1.64□□□□□ -2.15
CAF40P53829 BRP1YGL007W 378 nt1.64□□□□□ -2.15
CAF40P53829 YHR073W-AYHR073W-A 177 nt1.64□□□□□ -2.15
CAF40P53829 YML099W-AYML099W-A 330 nt1.64□□□□□ -2.15
CAF40P53829 snR51snR51 107 nt1.64□□□□□ -2.15
CAF40P53829 YLR035C-AYLR035C-A 3468 nt1.64□□□□□ -2.15
CAF40P53829 ZRG17YNR039C 1818 nt1.63□□□□□ -2.15
CAF40P53829 RPL38YLR325C 237 nt1.63□□□□□ -2.15
CAF40P53829 YOP1YPR028W 543 nt1.63□□□□□ -2.15
CAF40P53829 RFX1YLR176C 2436 nt1.63□□□□□ -2.15
CAF40P53829 snR65snR65 100 nt1.62□□□□□ -2.15
CAF40P53829 YCR102W-AYCR102W-A 198 nt1.62□□□□□ -2.15
CAF40P53829 SRP14YDL092W 441 nt1.62□□□□□ -2.15
CAF40P53829 YJL135WYJL135W 318 nt1.62□□□□□ -2.15
CAF40P53829 FAB1YFR019W 6837 nt1.62□□□□□ -2.15
CAF40P53829 SWI6YLR182W 2412 nt1.62□□□□□ -2.15
CAF40P53829 NAB6YML117W 3405 nt1.62□□□□□ -2.15
CAF40P53829 RIM20YOR275C 1986 nt1.61□□□□□ -2.15
CAF40P53829 YNL144CYNL144C 2223 nt1.61□□□□□ -2.15
CAF40P53829 EMP24YGL200C 612 nt1.61□□□□□ -2.15
CAF40P53829 RPL39YJL189W 156 nt1.61□□□□□ -2.15
CAF40P53829 YML007C-AYML007C-A 111 nt1.61□□□□□ -2.15
CAF40P53829 YDR426CYDR426C 378 nt1.6□□□□□ -2.15
CAF40P53829 YEL057CYEL057C 702 nt1.6□□□□□ -2.15
CAF40P53829 YGR265WYGR265W 411 nt1.6□□□□□ -2.15
CAF40P53829 FMP23YBR047W 528 nt1.6□□□□□ -2.15
CAF40P53829 MSH5YDL154W 2706 nt1.6□□□□□ -2.15
CAF40P53829 MYO4YAL029C 4416 nt1.59□□□□□ -2.15
CAF40P53829 YJR039WYJR039W 3366 nt1.59□□□□□ -2.15
CAF40P53829 snR72snR72 98 nt1.59□□□□□ -2.15
CAF40P53829 NPC2YDL046W 522 nt1.59□□□□□ -2.15
CAF40P53829 YAR029WYAR029W 225 nt1.59□□□□□ -2.15
CAF40P53829 YPR002C-AYPR002C-A 198 nt1.59□□□□□ -2.15
CAF40P53829 TFC8YPL007C 1767 nt1.59□□□□□ -2.16
CAF40P53829 HSH155YMR288W 2916 nt1.59□□□□□ -2.16
CAF40P53829 MUK1YPL070W 1839 nt1.59□□□□□ -2.16
CAF40P53829 YGR250CYGR250C 2346 nt1.58□□□□□ -2.16
CAF40P53829 HTL1YCR020W-B 237 nt1.58□□□□□ -2.16
CAF40P53829 YIL115W-AYIL115W-A 372 nt1.58□□□□□ -2.16
CAF40P53829 TRX1YLR043C 312 nt1.58□□□□□ -2.16
CAF40P53829 YLR255CYLR255C 354 nt1.58□□□□□ -2.16
CAF40P53829 PKH3YDR466W 2697 nt1.58□□□□□ -2.16
CAF40P53829 DBP6YNR038W 1890 nt1.58□□□□□ -2.16
CAF40P53829 YLL032CYLL032C 2478 nt1.58□□□□□ -2.16
CAF40P53829 TBS1YBR150C 3285 nt1.57□□□□□ -2.16
CAF40P53829 PCC1YKR095W-A 267 nt1.57□□□□□ -2.16
CAF40P53829 RPB10YOR210W 213 nt1.57□□□□□ -2.16
CAF40P53829 INP2YMR163C 2118 nt1.57□□□□□ -2.16
CAF40P53829 PEP1YBL017C 4740 nt1.57□□□□□ -2.16
CAF40P53829 VTC1YER072W 390 nt1.56□□□□□ -2.16
CAF40P53829 YIL102CYIL102C 306 nt1.56□□□□□ -2.16
CAF40P53829 YMR290W-AYMR290W-A 348 nt1.56□□□□□ -2.16
CAF40P53829 MDM20YOL076W 2391 nt1.56□□□□□ -2.16
CAF40P53829 SEC63YOR254C 1992 nt1.56□□□□□ -2.16
CAF40P53829 RLM1YPL089C 2031 nt1.56□□□□□ -2.16
CAF40P53829 IRA1YBR140C 9279 nt1.55□□□□□ -2.16
CAF40P53829 YGL149WYGL149W 306 nt1.55□□□□□ -2.16
CAF40P53829 YBR174CYBR174C 315 nt1.55□□□□□ -2.16
CAF40P53829 MAK10YEL053C 2202 nt1.55□□□□□ -2.16
CAF40P53829 MON2YNL297C 4911 nt1.55□□□□□ -2.16
CAF40P53829 YPP1YGR198W 2454 nt1.55□□□□□ -2.16
CAF40P53829 ENV11YGR071C 2583 nt1.54□□□□□ -2.16
CAF40P53829 ZIP1YDR285W 2628 nt1.54□□□□□ -2.16
CAF40P53829 GYP5YPL249C 2685 nt1.54□□□□□ -2.16
CAF40P53829 MSH6YDR097C 3729 nt1.54□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 63.6 ms