Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMSP52788 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMSP52788 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMSP52788 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.84■□□□□ 0.61
SMSP52788 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.84■□□□□ 0.61
SMSP52788 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMSP52788 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SMSP52788 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.83■□□□□ 0.61
SMSP52788 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMSP52788 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.83■□□□□ 0.61
SMSP52788 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
SMSP52788 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
SMSP52788 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SMSP52788 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SMSP52788 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMSP52788 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SMSP52788 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.83■□□□□ 0.6
SMSP52788 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
SMSP52788 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.83■□□□□ 0.6
SMSP52788 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMSP52788 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.83■□□□□ 0.6
SMSP52788 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.83■□□□□ 0.6
SMSP52788 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.83■□□□□ 0.6
SMSP52788 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMSP52788 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.83■□□□□ 0.6
SMSP52788 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.83■□□□□ 0.6
SMSP52788 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SMSP52788 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMSP52788 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SMSP52788 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.83■□□□□ 0.6
SMSP52788 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMSP52788 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SMSP52788 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.83■□□□□ 0.6
SMSP52788 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMSP52788 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SMSP52788 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.82■□□□□ 0.6
SMSP52788 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMSP52788 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.82■□□□□ 0.6
SMSP52788 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.82■□□□□ 0.6
SMSP52788 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMSP52788 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMSP52788 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.82■□□□□ 0.6
SMSP52788 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMSP52788 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.82■□□□□ 0.6
SMSP52788 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SMSP52788 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.82■□□□□ 0.6
SMSP52788 AC097658.1-201ENST00000475555 843 ntBASIC18.82■□□□□ 0.6
SMSP52788 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SMSP52788 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.82■□□□□ 0.6
SMSP52788 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.82■□□□□ 0.6
SMSP52788 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.82■□□□□ 0.6
SMSP52788 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SMSP52788 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMSP52788 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMSP52788 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SMSP52788 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMSP52788 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SMSP52788 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMSP52788 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMSP52788 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.82■□□□□ 0.6
SMSP52788 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SMSP52788 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.81■□□□□ 0.6
SMSP52788 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SMSP52788 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.81■□□□□ 0.6
SMSP52788 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.81■□□□□ 0.6
SMSP52788 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.81■□□□□ 0.6
SMSP52788 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SMSP52788 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 BX276092.2-201ENST00000417668 665 ntBASIC18.81■□□□□ 0.6
SMSP52788 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.81■□□□□ 0.6
SMSP52788 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.81■□□□□ 0.6
SMSP52788 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.81■□□□□ 0.6
SMSP52788 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.81■□□□□ 0.6
SMSP52788 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.81■□□□□ 0.6
SMSP52788 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.81■□□□□ 0.6
SMSP52788 AC016405.3-201ENST00000607710 860 ntBASIC18.81■□□□□ 0.6
SMSP52788 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.81■□□□□ 0.6
SMSP52788 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.81■□□□□ 0.6
SMSP52788 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.81■□□□□ 0.6
SMSP52788 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMSP52788 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.8■□□□□ 0.6
SMSP52788 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.8■□□□□ 0.6
SMSP52788 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMSP52788 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.8■□□□□ 0.6
SMSP52788 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms