Protein–RNA interactions for Protein: P46669

RPA43, DNA-directed RNA polymerase I subunit RPA43, yeastyeast

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA43P46669 snR14snR14 160 nt0.91□□□□□ -2.26
RPA43P46669 SEC3YER008C 4011 nt0.9□□□□□ -2.26
RPA43P46669 MXR1YER042W 555 nt0.9□□□□□ -2.27
RPA43P46669 YGR025WYGR025W 303 nt0.9□□□□□ -2.27
RPA43P46669 YHR139C-AYHR139C-A 312 nt0.9□□□□□ -2.27
RPA43P46669 YOR161W-BYOR161W-B 261 nt0.9□□□□□ -2.27
RPA43P46669 snR13snR13 124 nt0.9□□□□□ -2.27
RPA43P46669 AIM44YPL158C 2277 nt0.9□□□□□ -2.27
RPA43P46669 NST1YNL091W 3723 nt0.89□□□□□ -2.27
RPA43P46669 SPT21YMR179W 2277 nt0.89□□□□□ -2.27
RPA43P46669 YDR008CYDR008C 351 nt0.89□□□□□ -2.27
RPA43P46669 RPL9AYGL147C 576 nt0.89□□□□□ -2.27
RPA43P46669 YML009C-AYML009C-A 327 nt0.89□□□□□ -2.27
RPA43P46669 RCN2YOR220W 798 nt0.89□□□□□ -2.27
RPA43P46669 LYS14YDR034C 2373 nt0.89□□□□□ -2.27
RPA43P46669 NUP120YKL057C 3114 nt0.89□□□□□ -2.27
RPA43P46669 PIG1YLR273C 1947 nt0.88□□□□□ -2.27
RPA43P46669 TMA22YJR014W 597 nt0.88□□□□□ -2.27
RPA43P46669 YLR146W-AYLR146W-A 189 nt0.88□□□□□ -2.27
RPA43P46669 MPT5YGL178W 2580 nt0.88□□□□□ -2.27
RPA43P46669 SPT7YBR081C 3999 nt0.88□□□□□ -2.27
RPA43P46669 SPO23YBR250W 1572 nt0.87□□□□□ -2.27
RPA43P46669 YDR114CYDR114C 303 nt0.87□□□□□ -2.27
RPA43P46669 HUR1YGL168W 333 nt0.87□□□□□ -2.27
RPA43P46669 BIG1YHR101C 1008 nt0.87□□□□□ -2.27
RPA43P46669 SDH2YLL041C 801 nt0.87□□□□□ -2.27
RPA43P46669 HCH1YNL281W 462 nt0.87□□□□□ -2.27
RPA43P46669 NUT2YPR168W 474 nt0.87□□□□□ -2.27
RPA43P46669 PXA2YKL188C 2562 nt0.87□□□□□ -2.27
RPA43P46669 SCC2YDR180W 4482 nt0.87□□□□□ -2.27
RPA43P46669 SAS3YBL052C 2496 nt0.87□□□□□ -2.27
RPA43P46669 HMLALPHA2YCL067C 633 nt0.86□□□□□ -2.27
RPA43P46669 MATALPHA2YCR039C 633 nt0.86□□□□□ -2.27
RPA43P46669 EMC4YGL231C 573 nt0.86□□□□□ -2.27
RPA43P46669 EAF6YJR082C 342 nt0.86□□□□□ -2.27
RPA43P46669 SWI4YER111C 3282 nt0.86□□□□□ -2.27
RPA43P46669 SCW11YGL028C 1629 nt0.86□□□□□ -2.27
RPA43P46669 YER023C-AYER023C-A 213 nt0.85□□□□□ -2.27
RPA43P46669 RTR1YER139C 681 nt0.84□□□□□ -2.27
RPA43P46669 RPF1YHR088W 888 nt0.84□□□□□ -2.27
RPA43P46669 RPL32YBL092W 393 nt0.84□□□□□ -2.27
RPA43P46669 YNR025CYNR025C 360 nt0.84□□□□□ -2.27
RPA43P46669 PAC1YOR269W 1485 nt0.84□□□□□ -2.28
RPA43P46669 BEM2YER155C 6504 nt0.83□□□□□ -2.28
RPA43P46669 YER135CYER135C 393 nt0.83□□□□□ -2.28
RPA43P46669 YMR175W-AYMR175W-A 195 nt0.83□□□□□ -2.28
RPA43P46669 PBI2YNL015W 228 nt0.83□□□□□ -2.28
RPA43P46669 YOR029WYOR029W 336 nt0.83□□□□□ -2.28
RPA43P46669 COG4YPR105C 2586 nt0.83□□□□□ -2.28
RPA43P46669 SMC1YFL008W 3678 nt0.83□□□□□ -2.28
RPA43P46669 FIG4YNL325C 2640 nt0.83□□□□□ -2.28
RPA43P46669 YCR001WYCR001W 315 nt0.82□□□□□ -2.28
RPA43P46669 YGL239CYGL239C 315 nt0.82□□□□□ -2.28
RPA43P46669 URM1YIL008W 300 nt0.82□□□□□ -2.28
RPA43P46669 RPS27AYKL156W 249 nt0.82□□□□□ -2.28
RPA43P46669 YLR269CYLR269C 351 nt0.82□□□□□ -2.28
RPA43P46669 EAF1YDR359C 2949 nt0.82□□□□□ -2.28
RPA43P46669 SLY1YDR189W 2001 nt0.82□□□□□ -2.28
RPA43P46669 NUP145YGL092W 3954 nt0.82□□□□□ -2.28
RPA43P46669 YLL032CYLL032C 2478 nt0.81□□□□□ -2.28
RPA43P46669 YEL050W-AYEL050W-A 192 nt0.81□□□□□ -2.28
RPA43P46669 PHS1YJL097W 654 nt0.81□□□□□ -2.28
RPA43P46669 MRPL31YKL138C 396 nt0.81□□□□□ -2.28
RPA43P46669 RUF22RUF22 515 nt0.81□□□□□ -2.28
RPA43P46669 RFX1YLR176C 2436 nt0.81□□□□□ -2.28
RPA43P46669 YAR009CYAR009C 3591 nt0.81□□□□□ -2.28
RPA43P46669 APL3YBL037W 3078 nt0.81□□□□□ -2.28
RPA43P46669 CLU1YMR012W 3834 nt0.8□□□□□ -2.28
RPA43P46669 YIL059CYIL059C 366 nt0.8□□□□□ -2.28
RPA43P46669 RPL16AYIL133C 600 nt0.8□□□□□ -2.28
RPA43P46669 HIT1YJR055W 495 nt0.8□□□□□ -2.28
RPA43P46669 YBR221W-AYBR221W-A 105 nt0.8□□□□□ -2.28
RPA43P46669 STB6YKL072W 2301 nt0.8□□□□□ -2.28
RPA43P46669 EFR3YMR212C 2349 nt0.8□□□□□ -2.28
RPA43P46669 NUT1YGL151W 3399 nt0.79□□□□□ -2.28
RPA43P46669 YDR182W-AYDR182W-A 204 nt0.79□□□□□ -2.28
RPA43P46669 YDR269CYDR269C 324 nt0.79□□□□□ -2.28
RPA43P46669 NBL1YHR199C-A 222 nt0.79□□□□□ -2.28
RPA43P46669 PAM16YJL104W 450 nt0.79□□□□□ -2.28
RPA43P46669 UPS1YLR193C 528 nt0.79□□□□□ -2.28
RPA43P46669 YBR012CYBR012C 420 nt0.79□□□□□ -2.28
RPA43P46669 STO1YMR125W 2586 nt0.78□□□□□ -2.28
RPA43P46669 AIM9YER080W 1884 nt0.78□□□□□ -2.28
RPA43P46669 YER076W-AYER076W-A 348 nt0.78□□□□□ -2.28
RPA43P46669 STE18YJR086W 333 nt0.78□□□□□ -2.28
RPA43P46669 YBR200W-AYBR200W-A 165 nt0.78□□□□□ -2.28
RPA43P46669 RIM20YOR275C 1986 nt0.77□□□□□ -2.29
RPA43P46669 SET3YKR029C 2256 nt0.77□□□□□ -2.29
RPA43P46669 IFH1YLR223C 3258 nt0.77□□□□□ -2.29
RPA43P46669 CYC7YEL039C 342 nt0.77□□□□□ -2.29
RPA43P46669 YML108WYML108W 318 nt0.77□□□□□ -2.29
RPA43P46669 YPL182CYPL182C 384 nt0.77□□□□□ -2.29
RPA43P46669 LCD1YDR499W 2244 nt0.77□□□□□ -2.29
RPA43P46669 ROM2YLR371W 4071 nt0.77□□□□□ -2.29
RPA43P46669 DOP1YDR141C 5097 nt0.76□□□□□ -2.29
RPA43P46669 MMS4YBR098W 2076 nt0.76□□□□□ -2.29
RPA43P46669 YER087C-AYER087C-A 552 nt0.76□□□□□ -2.29
RPA43P46669 YGR045CYGR045C 363 nt0.76□□□□□ -2.29
RPA43P46669 YIL066W-AYIL066W-A 444 nt0.76□□□□□ -2.29
RPA43P46669 IRC23YOR044W 474 nt0.76□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 63 ms