Protein–RNA interactions for Protein: P39000

SHC1, Protein SHC1, yeastyeast

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHC1P39000 YAP3YHL009C 993 nt1.17□□□□□ -2.22
SHC1P39000 YBR032WYBR032W 303 nt1.17□□□□□ -2.22
SHC1P39000 YMR160WYMR160W 2451 nt1.16□□□□□ -2.22
SHC1P39000 NUP188YML103C 4968 nt1.16□□□□□ -2.22
SHC1P39000 NST1YNL091W 3723 nt1.16□□□□□ -2.22
SHC1P39000 SRP14YDL092W 441 nt1.16□□□□□ -2.22
SHC1P39000 YDR003W-AYDR003W-A 123 nt1.16□□□□□ -2.22
SHC1P39000 YHR139C-AYHR139C-A 312 nt1.16□□□□□ -2.22
SHC1P39000 YNR025CYNR025C 360 nt1.16□□□□□ -2.22
SHC1P39000 YOR376WYOR376W 369 nt1.16□□□□□ -2.22
SHC1P39000 MLH3YPL164C 2148 nt1.16□□□□□ -2.22
SHC1P39000 YOR192C-AYOR192C-A 1317 nt1.15□□□□□ -2.22
SHC1P39000 SWI5YDR146C 2130 nt1.15□□□□□ -2.23
SHC1P39000 YDR008CYDR008C 351 nt1.15□□□□□ -2.23
SHC1P39000 YGR025WYGR025W 303 nt1.14□□□□□ -2.23
SHC1P39000 APQ13YJL075C 417 nt1.14□□□□□ -2.23
SHC1P39000 RRT15YLR162W-A 189 nt1.14□□□□□ -2.23
SHC1P39000 YMR175W-AYMR175W-A 195 nt1.14□□□□□ -2.23
SHC1P39000 TIM18YOR297C 579 nt1.14□□□□□ -2.23
SHC1P39000 YOP1YPR028W 543 nt1.14□□□□□ -2.23
SHC1P39000 RAD50YNL250W 3939 nt1.13□□□□□ -2.23
SHC1P39000 YDL211CYDL211C 1119 nt1.13□□□□□ -2.23
SHC1P39000 YER023C-AYER023C-A 213 nt1.13□□□□□ -2.23
SHC1P39000 RPL9AYGL147C 576 nt1.13□□□□□ -2.23
SHC1P39000 YGL217CYGL217C 342 nt1.13□□□□□ -2.23
SHC1P39000 EMC4YGL231C 573 nt1.13□□□□□ -2.23
SHC1P39000 YHL009W-AYHL009W-A 1242 nt1.13□□□□□ -2.23
SHC1P39000 STE18YJR086W 333 nt1.13□□□□□ -2.23
SHC1P39000 snR13snR13 124 nt1.13□□□□□ -2.23
SHC1P39000 SLX4YLR135W 2247 nt1.13□□□□□ -2.23
SHC1P39000 AZF1YOR113W 2745 nt1.13□□□□□ -2.23
SHC1P39000 MSN5YDR335W 3675 nt1.13□□□□□ -2.23
SHC1P39000 YML009C-AYML009C-A 327 nt1.12□□□□□ -2.23
SHC1P39000 GPI15YNL038W 690 nt1.12□□□□□ -2.23
SHC1P39000 YJR029WYJR029W 5268 nt1.12□□□□□ -2.23
SHC1P39000 YPR137C-BYPR137C-B 5268 nt1.12□□□□□ -2.23
SHC1P39000 snR14snR14 160 nt1.11□□□□□ -2.23
SHC1P39000 TOF2YKR010C 2316 nt1.11□□□□□ -2.23
SHC1P39000 GDS1YOR355W 1569 nt1.1□□□□□ -2.23
SHC1P39000 YMR321CYMR321C 318 nt1.1□□□□□ -2.23
SHC1P39000 SCC2YDR180W 4482 nt1.1□□□□□ -2.23
SHC1P39000 SEC5YDR166C 2916 nt1.1□□□□□ -2.23
SHC1P39000 NUP157YER105C 4176 nt1.09□□□□□ -2.23
SHC1P39000 TSC3YBR058C-A 243 nt1.09□□□□□ -2.23
SHC1P39000 YBR071WYBR071W 636 nt1.09□□□□□ -2.23
SHC1P39000 YPR063CYPR063C 423 nt1.09□□□□□ -2.23
SHC1P39000 SGO1YOR073W 1773 nt1.08□□□□□ -2.24
SHC1P39000 MKT1YNL085W 2493 nt1.08□□□□□ -2.24
SHC1P39000 HMLALPHA2YCL067C 633 nt1.08□□□□□ -2.24
SHC1P39000 MATALPHA2YCR039C 633 nt1.08□□□□□ -2.24
SHC1P39000 YDL158CYDL158C 309 nt1.08□□□□□ -2.24
SHC1P39000 RPL32YBL092W 393 nt1.08□□□□□ -2.24
SHC1P39000 SPO23YBR250W 1572 nt1.08□□□□□ -2.24
SHC1P39000 RPF1YHR088W 888 nt1.07□□□□□ -2.24
SHC1P39000 BIG1YHR101C 1008 nt1.07□□□□□ -2.24
SHC1P39000 YPR153WYPR153W 423 nt1.07□□□□□ -2.24
SHC1P39000 ZIP1YDR285W 2628 nt1.07□□□□□ -2.24
SHC1P39000 PXA2YKL188C 2562 nt1.06□□□□□ -2.24
SHC1P39000 CDC39YCR093W 6327 nt1.06□□□□□ -2.24
SHC1P39000 SEC3YER008C 4011 nt1.06□□□□□ -2.24
SHC1P39000 WIP1YDR374W-A 270 nt1.06□□□□□ -2.24
SHC1P39000 MXR1YER042W 555 nt1.06□□□□□ -2.24
SHC1P39000 EMT1tM(CAU)D 73 nt1.06□□□□□ -2.24
SHC1P39000 EMT5tM(CAU)J1 73 nt1.06□□□□□ -2.24
SHC1P39000 EMT3tM(CAU)J2 73 nt1.06□□□□□ -2.24
SHC1P39000 EMT4tM(CAU)M 73 nt1.06□□□□□ -2.24
SHC1P39000 EMT2tM(CAU)O2 73 nt1.06□□□□□ -2.24
SHC1P39000 EAF6YJR082C 342 nt1.06□□□□□ -2.24
SHC1P39000 YKL145W-AYKL145W-A 93 nt1.06□□□□□ -2.24
SHC1P39000 LYS14YDR034C 2373 nt1.06□□□□□ -2.24
SHC1P39000 NUT1YGL151W 3399 nt1.05□□□□□ -2.24
SHC1P39000 YCR001WYCR001W 315 nt1.05□□□□□ -2.24
SHC1P39000 YER084W-AYER084W-A 513 nt1.05□□□□□ -2.24
SHC1P39000 RTR1YER139C 681 nt1.05□□□□□ -2.24
SHC1P39000 YLL020CYLL020C 306 nt1.05□□□□□ -2.24
SHC1P39000 YLR269CYLR269C 351 nt1.05□□□□□ -2.24
SHC1P39000 YMR153C-AYMR153C-A 336 nt1.05□□□□□ -2.24
SHC1P39000 PBI2YNL015W 228 nt1.05□□□□□ -2.24
SHC1P39000 RPL9BYNL067W 576 nt1.05□□□□□ -2.24
SHC1P39000 BEM2YER155C 6504 nt1.05□□□□□ -2.24
SHC1P39000 PIG1YLR273C 1947 nt1.04□□□□□ -2.24
SHC1P39000 MUK1YPL070W 1839 nt1.03□□□□□ -2.24
SHC1P39000 SWI4YER111C 3282 nt1.03□□□□□ -2.24
SHC1P39000 BUD3YCL014W 4911 nt1.03□□□□□ -2.24
SHC1P39000 URM1YIL008W 300 nt1.03□□□□□ -2.24
SHC1P39000 NFU1YKL040C 771 nt1.03□□□□□ -2.24
SHC1P39000 UBC7YMR022W 498 nt1.03□□□□□ -2.24
SHC1P39000 NUT2YPR168W 474 nt1.03□□□□□ -2.24
SHC1P39000 PRP16YKR086W 3216 nt1.02□□□□□ -2.25
SHC1P39000 YCS4YLR272C 3531 nt1.02□□□□□ -2.25
SHC1P39000 YDR182W-AYDR182W-A 204 nt1.02□□□□□ -2.25
SHC1P39000 EAF1YDR359C 2949 nt1.02□□□□□ -2.25
SHC1P39000 YGL239CYGL239C 315 nt1.02□□□□□ -2.25
SHC1P39000 NBL1YHR199C-A 222 nt1.02□□□□□ -2.25
SHC1P39000 APL3YBL037W 3078 nt1.02□□□□□ -2.25
SHC1P39000 YOR161W-BYOR161W-B 261 nt1.02□□□□□ -2.25
SHC1P39000 ENV11YGR071C 2583 nt1.02□□□□□ -2.25
SHC1P39000 STB6YKL072W 2301 nt1.01□□□□□ -2.25
SHC1P39000 YLR146W-AYLR146W-A 189 nt1.01□□□□□ -2.25
SHC1P39000 RUF22RUF22 515 nt1.01□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 112.3 ms