Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
PDE6BP35913 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25■■□□□ 1.59
PDE6BP35913 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
PDE6BP35913 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC25■■□□□ 1.59
PDE6BP35913 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25■■□□□ 1.59
PDE6BP35913 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
PDE6BP35913 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25■■□□□ 1.59
PDE6BP35913 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PDE6BP35913 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
PDE6BP35913 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PDE6BP35913 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25■■□□□ 1.59
PDE6BP35913 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PDE6BP35913 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25■■□□□ 1.59
PDE6BP35913 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC25■■□□□ 1.59
PDE6BP35913 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25■■□□□ 1.59
PDE6BP35913 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25■■□□□ 1.59
PDE6BP35913 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25■■□□□ 1.59
PDE6BP35913 KRT16P1-201ENST00000399124 1418 ntBASIC25■■□□□ 1.59
PDE6BP35913 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25■■□□□ 1.59
PDE6BP35913 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25■■□□□ 1.59
PDE6BP35913 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PDE6BP35913 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PDE6BP35913 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25■■□□□ 1.59
PDE6BP35913 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25■■□□□ 1.59
PDE6BP35913 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PDE6BP35913 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
PDE6BP35913 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE6BP35913 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE6BP35913 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE6BP35913 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PDE6BP35913 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE6BP35913 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
PDE6BP35913 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC24.99■■□□□ 1.59
PDE6BP35913 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE6BP35913 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.99■■□□□ 1.59
PDE6BP35913 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE6BP35913 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.99■■□□□ 1.59
PDE6BP35913 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.99■■□□□ 1.59
PDE6BP35913 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.99■■□□□ 1.59
PDE6BP35913 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC24.99■■□□□ 1.59
PDE6BP35913 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PDE6BP35913 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.99■■□□□ 1.59
PDE6BP35913 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PDE6BP35913 MIR2861-201ENST00000636310 90 ntBASIC24.99■■□□□ 1.59
PDE6BP35913 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE6BP35913 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC24.98■■□□□ 1.59
PDE6BP35913 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.98■■□□□ 1.59
PDE6BP35913 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.98■■□□□ 1.59
PDE6BP35913 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PDE6BP35913 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE6BP35913 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE6BP35913 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC24.98■■□□□ 1.59
PDE6BP35913 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE6BP35913 DUX4L26-201ENST00000489078 1255 ntBASIC24.98■■□□□ 1.59
PDE6BP35913 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.98■■□□□ 1.59
PDE6BP35913 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
PDE6BP35913 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PDE6BP35913 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE6BP35913 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
PDE6BP35913 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE6BP35913 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.97■■□□□ 1.59
PDE6BP35913 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.97■■□□□ 1.59
PDE6BP35913 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC24.97■■□□□ 1.59
PDE6BP35913 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PDE6BP35913 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE6BP35913 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE6BP35913 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE6BP35913 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE6BP35913 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.97■■□□□ 1.59
PDE6BP35913 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.97■■□□□ 1.59
PDE6BP35913 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PDE6BP35913 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC24.97■■□□□ 1.59
PDE6BP35913 NTF6B-201ENST00000591913 560 ntBASIC24.97■■□□□ 1.59
PDE6BP35913 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.97■■□□□ 1.59
PDE6BP35913 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE6BP35913 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
PDE6BP35913 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.96■■□□□ 1.59
PDE6BP35913 HLA-G-202ENST00000376815 851 ntBASIC24.96■■□□□ 1.59
PDE6BP35913 HLA-G-203ENST00000376818 1127 ntBASIC24.96■■□□□ 1.59
PDE6BP35913 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
PDE6BP35913 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.96■■□□□ 1.59
PDE6BP35913 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.96■■□□□ 1.59
PDE6BP35913 AC104076.2-201ENST00000448912 469 ntBASIC24.96■■□□□ 1.59
PDE6BP35913 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.96■■□□□ 1.59
PDE6BP35913 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.96■■□□□ 1.59
PDE6BP35913 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
PDE6BP35913 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
PDE6BP35913 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PDE6BP35913 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
PDE6BP35913 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PDE6BP35913 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
PDE6BP35913 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDE6BP35913 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
PDE6BP35913 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PDE6BP35913 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDE6BP35913 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDE6BP35913 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
PDE6BP35913 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.95■■□□□ 1.58
PDE6BP35913 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDE6BP35913 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms