Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDGFRAP16234 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.19■□□□□ 0.98
PDGFRAP16234 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDGFRAP16234 KRT17P1-201ENST00000399211 1546 ntBASIC21.19■□□□□ 0.98
PDGFRAP16234 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PDGFRAP16234 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PDGFRAP16234 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFRAP16234 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFRAP16234 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.18■□□□□ 0.98
PDGFRAP16234 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFRAP16234 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.18■□□□□ 0.98
PDGFRAP16234 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFRAP16234 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.18■□□□□ 0.98
PDGFRAP16234 AL589743.5-201ENST00000616611 1050 ntBASIC21.18■□□□□ 0.98
PDGFRAP16234 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDGFRAP16234 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.18■□□□□ 0.98
PDGFRAP16234 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.18■□□□□ 0.98
PDGFRAP16234 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFRAP16234 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFRAP16234 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFRAP16234 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.17■□□□□ 0.98
PDGFRAP16234 MIPEPP3-201ENST00000412105 444 ntBASIC21.17■□□□□ 0.98
PDGFRAP16234 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.17■□□□□ 0.98
PDGFRAP16234 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFRAP16234 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.17■□□□□ 0.98
PDGFRAP16234 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.17■□□□□ 0.98
PDGFRAP16234 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFRAP16234 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFRAP16234 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.17■□□□□ 0.98
PDGFRAP16234 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.17■□□□□ 0.98
PDGFRAP16234 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.17■□□□□ 0.98
PDGFRAP16234 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.17■□□□□ 0.98
PDGFRAP16234 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.17■□□□□ 0.98
PDGFRAP16234 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFRAP16234 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFRAP16234 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDGFRAP16234 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
PDGFRAP16234 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PDGFRAP16234 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFRAP16234 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.16■□□□□ 0.98
PDGFRAP16234 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.16■□□□□ 0.98
PDGFRAP16234 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFRAP16234 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFRAP16234 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFRAP16234 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.16■□□□□ 0.98
PDGFRAP16234 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.16■□□□□ 0.98
PDGFRAP16234 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.16■□□□□ 0.98
PDGFRAP16234 AC098934.4-201ENST00000564127 592 ntBASIC21.16■□□□□ 0.98
PDGFRAP16234 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.16■□□□□ 0.98
PDGFRAP16234 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFRAP16234 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDGFRAP16234 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.16■□□□□ 0.98
PDGFRAP16234 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFRAP16234 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFRAP16234 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFRAP16234 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.15■□□□□ 0.98
PDGFRAP16234 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
PDGFRAP16234 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFRAP16234 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFRAP16234 LSM12P1-201ENST00000411836 588 ntBASIC21.15■□□□□ 0.98
PDGFRAP16234 BX276092.2-201ENST00000417668 665 ntBASIC21.15■□□□□ 0.98
PDGFRAP16234 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.15■□□□□ 0.98
PDGFRAP16234 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.15■□□□□ 0.98
PDGFRAP16234 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.15■□□□□ 0.98
PDGFRAP16234 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PDGFRAP16234 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFRAP16234 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PDGFRAP16234 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFRAP16234 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDGFRAP16234 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PDGFRAP16234 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PDGFRAP16234 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.14■□□□□ 0.98
PDGFRAP16234 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.14■□□□□ 0.98
PDGFRAP16234 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
PDGFRAP16234 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDGFRAP16234 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDGFRAP16234 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFRAP16234 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PDGFRAP16234 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PDGFRAP16234 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFRAP16234 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.14■□□□□ 0.97
PDGFRAP16234 AL391422.3-201ENST00000603791 2761 ntBASIC21.14■□□□□ 0.97
PDGFRAP16234 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFRAP16234 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFRAP16234 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.14■□□□□ 0.97
PDGFRAP16234 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFRAP16234 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.14■□□□□ 0.97
PDGFRAP16234 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFRAP16234 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDGFRAP16234 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFRAP16234 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFRAP16234 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFRAP16234 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PDGFRAP16234 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.13■□□□□ 0.97
PDGFRAP16234 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.13■□□□□ 0.97
PDGFRAP16234 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFRAP16234 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDGFRAP16234 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms