Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PF4V1P10720 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.97■□□□□ 0.15
PF4V1P10720 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PF4V1P10720 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PF4V1P10720 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.97■□□□□ 0.15
PF4V1P10720 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 AC006128.1-201ENST00000624704 1661 ntBASIC15.96■□□□□ 0.15
PF4V1P10720 AC087633.2-202ENST00000565166 1439 ntBASIC15.96■□□□□ 0.15
PF4V1P10720 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.96■□□□□ 0.15
PF4V1P10720 AC027702.1-201ENST00000563810 1770 ntBASIC15.96■□□□□ 0.15
PF4V1P10720 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.96■□□□□ 0.15
PF4V1P10720 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 KRT17P1-201ENST00000399211 1546 ntBASIC15.96■□□□□ 0.15
PF4V1P10720 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.96■□□□□ 0.15
PF4V1P10720 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.96■□□□□ 0.15
PF4V1P10720 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.96■□□□□ 0.15
PF4V1P10720 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.96■□□□□ 0.15
PF4V1P10720 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PF4V1P10720 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PF4V1P10720 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.96■□□□□ 0.15
PF4V1P10720 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PF4V1P10720 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PF4V1P10720 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.96■□□□□ 0.14
PF4V1P10720 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.96■□□□□ 0.14
PF4V1P10720 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PF4V1P10720 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PF4V1P10720 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PF4V1P10720 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.95■□□□□ 0.14
PF4V1P10720 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PF4V1P10720 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 AL158047.1-201ENST00000445918 881 ntBASIC15.95■□□□□ 0.14
PF4V1P10720 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.95■□□□□ 0.14
PF4V1P10720 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.95■□□□□ 0.14
PF4V1P10720 AP003097.1-201ENST00000530657 1135 ntBASIC15.95■□□□□ 0.14
PF4V1P10720 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.95■□□□□ 0.14
PF4V1P10720 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 AL356652.1-201ENST00000615962 565 ntBASIC15.95■□□□□ 0.14
PF4V1P10720 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.95■□□□□ 0.14
PF4V1P10720 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PF4V1P10720 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PF4V1P10720 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.95■□□□□ 0.14
PF4V1P10720 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PF4V1P10720 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PF4V1P10720 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PF4V1P10720 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
PF4V1P10720 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PF4V1P10720 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PF4V1P10720 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PF4V1P10720 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PF4V1P10720 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.94■□□□□ 0.14
PF4V1P10720 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PF4V1P10720 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PF4V1P10720 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PF4V1P10720 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.94■□□□□ 0.14
PF4V1P10720 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.94■□□□□ 0.14
PF4V1P10720 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.94■□□□□ 0.14
PF4V1P10720 AC026366.1-201ENST00000488803 879 ntBASIC15.94■□□□□ 0.14
PF4V1P10720 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.94■□□□□ 0.14
PF4V1P10720 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC15.94■□□□□ 0.14
PF4V1P10720 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.94■□□□□ 0.14
PF4V1P10720 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PF4V1P10720 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PF4V1P10720 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.94■□□□□ 0.14
PF4V1P10720 FP700111.2-201ENST00000619190 1892 ntBASIC15.94■□□□□ 0.14
PF4V1P10720 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PF4V1P10720 HCG11-201ENST00000411553 5696 ntBASIC15.94■□□□□ 0.14
PF4V1P10720 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PF4V1P10720 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PF4V1P10720 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PF4V1P10720 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PF4V1P10720 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.93■□□□□ 0.14
PF4V1P10720 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
PF4V1P10720 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PF4V1P10720 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PF4V1P10720 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PF4V1P10720 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.93■□□□□ 0.14
PF4V1P10720 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms