Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CSB-PGBD3P0DP91 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 AL031963.3-201ENST00000606441 850 ntBASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC26.85■■□□□ 1.89
CSB-PGBD3P0DP91 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 KRT8P36-201ENST00000489121 1440 ntBASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 AC027702.1-201ENST00000563810 1770 ntBASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CSB-PGBD3P0DP91 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 TREX2-204ENST00000370212 861 ntTSL 5 BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 GLDC-219ENST00000640208 420 ntTSL 2 BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CSB-PGBD3P0DP91 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.88
CSB-PGBD3P0DP91 LINC01568-207ENST00000641790 1380 ntBASIC26.83■■□□□ 1.88
CSB-PGBD3P0DP91 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 KRT18P57-201ENST00000443599 1254 ntBASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CSB-PGBD3P0DP91 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 AL390955.1-201ENST00000428694 934 ntBASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CSB-PGBD3P0DP91 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 CR392000.1-201ENST00000624770 1228 ntBASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 MIR2861-201ENST00000636310 90 ntBASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CSB-PGBD3P0DP91 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.79■■□□□ 1.88
CSB-PGBD3P0DP91 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CSB-PGBD3P0DP91 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.79■■□□□ 1.88
CSB-PGBD3P0DP91 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms