Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.85■■□□□ 1.73
SNRPA1P09661 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRPA1P09661 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNRPA1P09661 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNRPA1P09661 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNRPA1P09661 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNRPA1P09661 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNRPA1P09661 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SNRPA1P09661 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SNRPA1P09661 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.84■■□□□ 1.73
SNRPA1P09661 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.84■■□□□ 1.73
SNRPA1P09661 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNRPA1P09661 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
SNRPA1P09661 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNRPA1P09661 AC113410.3-201ENST00000623366 203 ntBASIC25.84■■□□□ 1.73
SNRPA1P09661 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC25.84■■□□□ 1.73
SNRPA1P09661 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNRPA1P09661 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SNRPA1P09661 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.84■■□□□ 1.73
SNRPA1P09661 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNRPA1P09661 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNRPA1P09661 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNRPA1P09661 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
SNRPA1P09661 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.83■■□□□ 1.73
SNRPA1P09661 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SNRPA1P09661 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNRPA1P09661 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.83■■□□□ 1.73
SNRPA1P09661 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNRPA1P09661 KRT17P2-201ENST00000300992 1314 ntBASIC25.83■■□□□ 1.73
SNRPA1P09661 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNRPA1P09661 AF106564.1-201ENST00000607058 2553 ntBASIC25.83■■□□□ 1.72
SNRPA1P09661 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNRPA1P09661 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNRPA1P09661 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNRPA1P09661 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.82■■□□□ 1.72
SNRPA1P09661 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
SNRPA1P09661 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SNRPA1P09661 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNRPA1P09661 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.82■■□□□ 1.72
SNRPA1P09661 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.82■■□□□ 1.72
SNRPA1P09661 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.82■■□□□ 1.72
SNRPA1P09661 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SNRPA1P09661 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNRPA1P09661 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
SNRPA1P09661 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SNRPA1P09661 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNRPA1P09661 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC25.81■■□□□ 1.72
SNRPA1P09661 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
SNRPA1P09661 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNRPA1P09661 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNRPA1P09661 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNRPA1P09661 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNRPA1P09661 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
SNRPA1P09661 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.81■■□□□ 1.72
SNRPA1P09661 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.81■■□□□ 1.72
SNRPA1P09661 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
SNRPA1P09661 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNRPA1P09661 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.81■■□□□ 1.72
SNRPA1P09661 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNRPA1P09661 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNRPA1P09661 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNRPA1P09661 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNRPA1P09661 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNRPA1P09661 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
SNRPA1P09661 HLA-G-202ENST00000376815 851 ntBASIC25.8■■□□□ 1.72
SNRPA1P09661 HLA-G-203ENST00000376818 1127 ntBASIC25.8■■□□□ 1.72
SNRPA1P09661 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNRPA1P09661 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNRPA1P09661 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNRPA1P09661 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.8■■□□□ 1.72
SNRPA1P09661 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
SNRPA1P09661 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.8■■□□□ 1.72
SNRPA1P09661 REXO1L12P-201ENST00000622156 912 ntBASIC25.8■■□□□ 1.72
SNRPA1P09661 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.8■■□□□ 1.72
SNRPA1P09661 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
SNRPA1P09661 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNRPA1P09661 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNRPA1P09661 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.8■■□□□ 1.72
SNRPA1P09661 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNRPA1P09661 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNRPA1P09661 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SNRPA1P09661 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SNRPA1P09661 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNRPA1P09661 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
SNRPA1P09661 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SNRPA1P09661 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SNRPA1P09661 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.79■■□□□ 1.72
SNRPA1P09661 AL121906.2-201ENST00000621597 723 ntBASIC25.79■■□□□ 1.72
SNRPA1P09661 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SNRPA1P09661 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SNRPA1P09661 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNRPA1P09661 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNRPA1P09661 NBPF21P-201ENST00000425093 1451 ntBASIC25.79■■□□□ 1.72
SNRPA1P09661 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNRPA1P09661 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.78■■□□□ 1.72
SNRPA1P09661 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNRPA1P09661 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNRPA1P09661 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNRPA1P09661 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNRPA1P09661 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms