Protein–RNA interactions for Protein: P06844

SPT3, Protein SPT3, yeastyeast

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT3P06844 PIG1YLR273C 1947 nt0.87□□□□□ -2.27
SPT3P06844 YDR008CYDR008C 351 nt0.85□□□□□ -2.27
SPT3P06844 IRC23YOR044W 474 nt0.85□□□□□ -2.27
SPT3P06844 YPR039WYPR039W 336 nt0.85□□□□□ -2.27
SPT3P06844 YCS4YLR272C 3531 nt0.84□□□□□ -2.27
SPT3P06844 YNL319WYNL319W 441 nt0.84□□□□□ -2.27
SPT3P06844 YOR248WYOR248W 303 nt0.84□□□□□ -2.27
SPT3P06844 APL2YKL135C 2181 nt0.84□□□□□ -2.28
SPT3P06844 LYS14YDR034C 2373 nt0.84□□□□□ -2.28
SPT3P06844 NUP145YGL092W 3954 nt0.84□□□□□ -2.28
SPT3P06844 AIM44YPL158C 2277 nt0.84□□□□□ -2.28
SPT3P06844 SPO23YBR250W 1572 nt0.83□□□□□ -2.28
SPT3P06844 NUT1YGL151W 3399 nt0.83□□□□□ -2.28
SPT3P06844 YKL044WYKL044W 321 nt0.83□□□□□ -2.28
SPT3P06844 YBR221W-AYBR221W-A 105 nt0.83□□□□□ -2.28
SPT3P06844 AIM9YER080W 1884 nt0.83□□□□□ -2.28
SPT3P06844 SCW11YGL028C 1629 nt0.82□□□□□ -2.28
SPT3P06844 YDR114CYDR114C 303 nt0.82□□□□□ -2.28
SPT3P06844 ILM1YJR118C 612 nt0.82□□□□□ -2.28
SPT3P06844 YKL068W-AYKL068W-A 237 nt0.82□□□□□ -2.28
SPT3P06844 YMR175W-AYMR175W-A 195 nt0.82□□□□□ -2.28
SPT3P06844 RUF22RUF22 515 nt0.82□□□□□ -2.28
SPT3P06844 ERP4YOR016C 624 nt0.82□□□□□ -2.28
SPT3P06844 FIG4YNL325C 2640 nt0.82□□□□□ -2.28
SPT3P06844 snR78snR78 87 nt0.81□□□□□ -2.28
SPT3P06844 CYC7YEL039C 342 nt0.81□□□□□ -2.28
SPT3P06844 SDH2YLL041C 801 nt0.81□□□□□ -2.28
SPT3P06844 BER1YLR412W 825 nt0.81□□□□□ -2.28
SPT3P06844 SET3YKR029C 2256 nt0.8□□□□□ -2.28
SPT3P06844 RPL16AYIL133C 600 nt0.8□□□□□ -2.28
SPT3P06844 YBR012CYBR012C 420 nt0.8□□□□□ -2.28
SPT3P06844 SWI6YLR182W 2412 nt0.8□□□□□ -2.28
SPT3P06844 tR(UCU)Q1tR(UCU)Q1 73 nt0.79□□□□□ -2.28
SPT3P06844 HIT1YJR055W 495 nt0.79□□□□□ -2.28
SPT3P06844 YJR141WYJR141W 1044 nt0.79□□□□□ -2.28
SPT3P06844 YLR146W-AYLR146W-A 189 nt0.79□□□□□ -2.28
SPT3P06844 SVS1YPL163C 783 nt0.79□□□□□ -2.28
SPT3P06844 STO1YMR125W 2586 nt0.79□□□□□ -2.28
SPT3P06844 PXA2YKL188C 2562 nt0.78□□□□□ -2.28
SPT3P06844 UBP3YER151C 2739 nt0.78□□□□□ -2.28
SPT3P06844 YDR182W-AYDR182W-A 204 nt0.78□□□□□ -2.28
SPT3P06844 YFL012WYFL012W 447 nt0.78□□□□□ -2.28
SPT3P06844 YGR045CYGR045C 363 nt0.78□□□□□ -2.28
SPT3P06844 YIL142C-AYIL142C-A 333 nt0.78□□□□□ -2.28
SPT3P06844 TMA22YJR014W 597 nt0.78□□□□□ -2.28
SPT3P06844 UBX4YMR067C 1251 nt0.78□□□□□ -2.28
SPT3P06844 YBR200W-AYBR200W-A 165 nt0.78□□□□□ -2.28
SPT3P06844 SAS3YBL052C 2496 nt0.77□□□□□ -2.29
SPT3P06844 YDL016CYDL016C 303 nt0.77□□□□□ -2.29
SPT3P06844 NHP2YDL208W 471 nt0.77□□□□□ -2.29
SPT3P06844 YDL206WYDL206W 2289 nt0.76□□□□□ -2.29
SPT3P06844 RIM20YOR275C 1986 nt0.76□□□□□ -2.29
SPT3P06844 SNU56YDR240C 1479 nt0.76□□□□□ -2.29
SPT3P06844 YHR139C-AYHR139C-A 312 nt0.76□□□□□ -2.29
SPT3P06844 YML009C-AYML009C-A 327 nt0.76□□□□□ -2.29
SPT3P06844 RPL32YBL092W 393 nt0.76□□□□□ -2.29
SPT3P06844 RKR1YMR247C 4689 nt0.76□□□□□ -2.29
SPT3P06844 NUP157YER105C 4176 nt0.76□□□□□ -2.29
SPT3P06844 YLL032CYLL032C 2478 nt0.75□□□□□ -2.29
SPT3P06844 YDR521WYDR521W 336 nt0.75□□□□□ -2.29
SPT3P06844 HUR1YGL168W 333 nt0.75□□□□□ -2.29
SPT3P06844 UPS1YLR193C 528 nt0.75□□□□□ -2.29
SPT3P06844 SLD3YGL113W 2007 nt0.75□□□□□ -2.29
SPT3P06844 YER023C-AYER023C-A 213 nt0.74□□□□□ -2.29
SPT3P06844 YER135CYER135C 393 nt0.74□□□□□ -2.29
SPT3P06844 YGR025WYGR025W 303 nt0.74□□□□□ -2.29
SPT3P06844 MRPL31YKL138C 396 nt0.74□□□□□ -2.29
SPT3P06844 YBL029C-AYBL029C-A 285 nt0.74□□□□□ -2.29
SPT3P06844 PRP16YKR086W 3216 nt0.74□□□□□ -2.29
SPT3P06844 LCD1YDR499W 2244 nt0.73□□□□□ -2.29
SPT3P06844 PDE2YOR360C 1581 nt0.73□□□□□ -2.29
SPT3P06844 RFX1YLR176C 2436 nt0.73□□□□□ -2.29
SPT3P06844 SLY1YDR189W 2001 nt0.72□□□□□ -2.29
SPT3P06844 OCA6YDR067C 675 nt0.72□□□□□ -2.29
SPT3P06844 MXR1YER042W 555 nt0.72□□□□□ -2.29
SPT3P06844 NBL1YHR199C-A 222 nt0.72□□□□□ -2.29
SPT3P06844 APQ13YJL075C 417 nt0.72□□□□□ -2.29
SPT3P06844 CMC4YMR194C-B 222 nt0.72□□□□□ -2.29
SPT3P06844 snR13snR13 124 nt0.72□□□□□ -2.29
SPT3P06844 MMS4YBR098W 2076 nt0.72□□□□□ -2.29
SPT3P06844 YDR029WYDR029W 315 nt0.71□□□□□ -2.3
SPT3P06844 YER076W-AYER076W-A 348 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)BtT(AGU)B 73 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)CtT(AGU)C 73 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)DtT(AGU)D 73 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)HtT(AGU)H 73 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)I1tT(AGU)I1 73 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)I2tT(AGU)I2 73 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)JtT(AGU)J 73 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)N1tT(AGU)N1 73 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)N2tT(AGU)N2 73 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)O1tT(AGU)O1 73 nt0.71□□□□□ -2.3
SPT3P06844 tT(AGU)O2tT(AGU)O2 73 nt0.71□□□□□ -2.3
SPT3P06844 YOR199WYOR199W 330 nt0.71□□□□□ -2.3
SPT3P06844 TSC3YBR058C-A 243 nt0.71□□□□□ -2.3
SPT3P06844 ENV11YGR071C 2583 nt0.71□□□□□ -2.3
SPT3P06844 MET32YDR253C 576 nt0.7□□□□□ -2.3
SPT3P06844 YGL239CYGL239C 315 nt0.7□□□□□ -2.3
SPT3P06844 PHS1YJL097W 654 nt0.7□□□□□ -2.3
SPT3P06844 PAM16YJL104W 450 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 26.3 ms