Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.55■■□□□ 1.2
TPM3P06753 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.55■■□□□ 1.2
TPM3P06753 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 AC061975.6-201ENST00000579045 1553 ntBASIC22.55■■□□□ 1.2
TPM3P06753 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.55■■□□□ 1.2
TPM3P06753 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.55■■□□□ 1.2
TPM3P06753 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.55■■□□□ 1.2
TPM3P06753 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TPM3P06753 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.54■■□□□ 1.2
TPM3P06753 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TPM3P06753 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.54■■□□□ 1.2
TPM3P06753 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TPM3P06753 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.54■■□□□ 1.2
TPM3P06753 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TPM3P06753 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TPM3P06753 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TPM3P06753 AC008175.2-201ENST00000612840 297 ntBASIC22.54■■□□□ 1.2
TPM3P06753 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.54■■□□□ 1.2
TPM3P06753 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.54■■□□□ 1.2
TPM3P06753 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
TPM3P06753 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.54■■□□□ 1.2
TPM3P06753 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 TSPY26P-201ENST00000476365 1326 ntBASIC22.54■■□□□ 1.2
TPM3P06753 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TPM3P06753 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TPM3P06753 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TPM3P06753 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TPM3P06753 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TPM3P06753 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TPM3P06753 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.53■■□□□ 1.2
TPM3P06753 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.53■■□□□ 1.2
TPM3P06753 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
TPM3P06753 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.53■■□□□ 1.2
TPM3P06753 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TPM3P06753 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.53■■□□□ 1.2
TPM3P06753 AC024257.2-201ENST00000549699 147 ntBASIC22.53■■□□□ 1.2
TPM3P06753 AL136162.1-201ENST00000607711 1078 ntBASIC22.53■■□□□ 1.2
TPM3P06753 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TPM3P06753 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TPM3P06753 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TPM3P06753 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TPM3P06753 AC135279.3-201ENST00000610945 1311 ntBASIC22.53■■□□□ 1.2
TPM3P06753 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TPM3P06753 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.53■■□□□ 1.2
TPM3P06753 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
TPM3P06753 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 POU5F1P4-201ENST00000413175 1085 ntBASIC22.52■■□□□ 1.2
TPM3P06753 AC008764.7-201ENST00000593779 1081 ntBASIC22.52■■□□□ 1.2
TPM3P06753 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.52■■□□□ 1.2
TPM3P06753 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
TPM3P06753 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TPM3P06753 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.52■■□□□ 1.2
TPM3P06753 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.52■■□□□ 1.19
TPM3P06753 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TPM3P06753 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
TPM3P06753 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.51■■□□□ 1.19
TPM3P06753 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TPM3P06753 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TPM3P06753 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.51■■□□□ 1.19
TPM3P06753 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TPM3P06753 TMEM179-206ENST00000616017 1645 ntBASIC22.51■■□□□ 1.19
TPM3P06753 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TPM3P06753 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.51■■□□□ 1.19
TPM3P06753 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.51■■□□□ 1.19
TPM3P06753 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
TPM3P06753 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TPM3P06753 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TPM3P06753 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TPM3P06753 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms