Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PDGFAP04085 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PDGFAP04085 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.84■□□□□ 0.61
PDGFAP04085 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.84■□□□□ 0.61
PDGFAP04085 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PDGFAP04085 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PDGFAP04085 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.84■□□□□ 0.61
PDGFAP04085 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.84■□□□□ 0.61
PDGFAP04085 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
PDGFAP04085 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.84■□□□□ 0.61
PDGFAP04085 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFAP04085 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.84■□□□□ 0.61
PDGFAP04085 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
PDGFAP04085 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFAP04085 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDGFAP04085 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDGFAP04085 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
PDGFAP04085 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFAP04085 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFAP04085 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFAP04085 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFAP04085 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFAP04085 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFAP04085 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.83■□□□□ 0.61
PDGFAP04085 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.83■□□□□ 0.61
PDGFAP04085 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.83■□□□□ 0.61
PDGFAP04085 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
PDGFAP04085 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.83■□□□□ 0.6
PDGFAP04085 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.83■□□□□ 0.6
PDGFAP04085 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.83■□□□□ 0.6
PDGFAP04085 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.83■□□□□ 0.6
PDGFAP04085 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.83■□□□□ 0.6
PDGFAP04085 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.83■□□□□ 0.6
PDGFAP04085 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFAP04085 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PDGFAP04085 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFAP04085 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.82■□□□□ 0.6
PDGFAP04085 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFAP04085 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.82■□□□□ 0.6
PDGFAP04085 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 AL049637.2-201ENST00000641778 930 ntBASIC18.82■□□□□ 0.6
PDGFAP04085 AC116050.2-201ENST00000612102 1779 ntBASIC18.82■□□□□ 0.6
PDGFAP04085 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFAP04085 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PDGFAP04085 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFAP04085 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFAP04085 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.81■□□□□ 0.6
PDGFAP04085 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFAP04085 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.81■□□□□ 0.6
PDGFAP04085 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PDGFAP04085 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 AC133681.1-201ENST00000465482 601 ntBASIC18.81■□□□□ 0.6
PDGFAP04085 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.81■□□□□ 0.6
PDGFAP04085 AC006557.6-201ENST00000623071 864 ntBASIC18.81■□□□□ 0.6
PDGFAP04085 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFAP04085 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFAP04085 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDGFAP04085 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PDGFAP04085 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFAP04085 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFAP04085 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PDGFAP04085 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFAP04085 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PDGFAP04085 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFAP04085 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDGFAP04085 AC239809.2-201ENST00000415381 517 ntBASIC18.8■□□□□ 0.6
PDGFAP04085 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms