Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
HMGCRP04035 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.88■■□□□ 1.25
HMGCRP04035 AL137013.1-201ENST00000432946 1228 ntBASIC22.88■■□□□ 1.25
HMGCRP04035 AC023632.3-201ENST00000521633 145 ntBASIC22.88■■□□□ 1.25
HMGCRP04035 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.88■■□□□ 1.25
HMGCRP04035 AC004264.1-201ENST00000608354 794 ntBASIC22.88■■□□□ 1.25
HMGCRP04035 AL121906.2-201ENST00000621597 723 ntBASIC22.88■■□□□ 1.25
HMGCRP04035 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
HMGCRP04035 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
HMGCRP04035 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HMGCRP04035 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.87■■□□□ 1.25
HMGCRP04035 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HMGCRP04035 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.87■■□□□ 1.25
HMGCRP04035 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
HMGCRP04035 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
HMGCRP04035 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
HMGCRP04035 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.87■■□□□ 1.25
HMGCRP04035 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.87■■□□□ 1.25
HMGCRP04035 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.87■■□□□ 1.25
HMGCRP04035 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.87■■□□□ 1.25
HMGCRP04035 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
HMGCRP04035 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.87■■□□□ 1.25
HMGCRP04035 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.87■■□□□ 1.25
HMGCRP04035 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
HMGCRP04035 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.87■■□□□ 1.25
HMGCRP04035 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
HMGCRP04035 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.87■■□□□ 1.25
HMGCRP04035 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
HMGCRP04035 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
HMGCRP04035 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HMGCRP04035 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.87■■□□□ 1.25
HMGCRP04035 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HMGCRP04035 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.86■■□□□ 1.25
HMGCRP04035 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
HMGCRP04035 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HMGCRP04035 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.86■■□□□ 1.25
HMGCRP04035 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HMGCRP04035 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HMGCRP04035 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HMGCRP04035 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HMGCRP04035 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.86■■□□□ 1.25
HMGCRP04035 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.86■■□□□ 1.25
HMGCRP04035 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.86■■□□□ 1.25
HMGCRP04035 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.86■■□□□ 1.25
HMGCRP04035 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HMGCRP04035 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HMGCRP04035 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
HMGCRP04035 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
HMGCRP04035 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.86■■□□□ 1.25
HMGCRP04035 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HMGCRP04035 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HMGCRP04035 AC073508.3-201ENST00000619697 1419 ntBASIC22.85■■□□□ 1.25
HMGCRP04035 AC079834.2-201ENST00000609776 1949 ntBASIC22.85■■□□□ 1.25
HMGCRP04035 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.85■■□□□ 1.25
HMGCRP04035 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HMGCRP04035 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
HMGCRP04035 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
HMGCRP04035 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
HMGCRP04035 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.84■■□□□ 1.25
HMGCRP04035 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HMGCRP04035 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HMGCRP04035 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HMGCRP04035 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HMGCRP04035 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.84■■□□□ 1.25
HMGCRP04035 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
HMGCRP04035 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
HMGCRP04035 AL390955.1-201ENST00000428694 934 ntBASIC22.84■■□□□ 1.25
HMGCRP04035 SLC25A3P1-201ENST00000443844 931 ntBASIC22.84■■□□□ 1.25
HMGCRP04035 FITM1-202ENST00000559294 800 ntBASIC22.84■■□□□ 1.25
HMGCRP04035 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.84■■□□□ 1.25
HMGCRP04035 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
HMGCRP04035 CYP2D8P-201ENST00000433633 1490 ntBASIC22.84■■□□□ 1.25
HMGCRP04035 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
HMGCRP04035 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
HMGCRP04035 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HMGCRP04035 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
HMGCRP04035 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.83■■□□□ 1.25
HMGCRP04035 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
HMGCRP04035 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
HMGCRP04035 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
HMGCRP04035 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.83■■□□□ 1.25
HMGCRP04035 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HMGCRP04035 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.83■■□□□ 1.25
HMGCRP04035 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.83■■□□□ 1.25
HMGCRP04035 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.83■■□□□ 1.25
HMGCRP04035 AC010947.1-201ENST00000623454 693 ntBASIC22.83■■□□□ 1.25
HMGCRP04035 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
HMGCRP04035 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
HMGCRP04035 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.83■■□□□ 1.24
HMGCRP04035 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
HMGCRP04035 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.82■■□□□ 1.24
HMGCRP04035 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HMGCRP04035 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.82■■□□□ 1.24
HMGCRP04035 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.82■■□□□ 1.24
HMGCRP04035 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
HMGCRP04035 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.82■■□□□ 1.24
HMGCRP04035 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.82■■□□□ 1.24
HMGCRP04035 DUX4L26-201ENST00000489078 1255 ntBASIC22.82■■□□□ 1.24
HMGCRP04035 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
HMGCRP04035 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms