Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
OPN1SWP03999 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.81■□□□□ 0.6
OPN1SWP03999 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
OPN1SWP03999 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
OPN1SWP03999 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
OPN1SWP03999 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.81■□□□□ 0.6
OPN1SWP03999 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OPN1SWP03999 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.81■□□□□ 0.6
OPN1SWP03999 AC243732.1-201ENST00000612648 864 ntBASIC18.81■□□□□ 0.6
OPN1SWP03999 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.81■□□□□ 0.6
OPN1SWP03999 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.81■□□□□ 0.6
OPN1SWP03999 AC116562.4-201ENST00000641316 2276 ntBASIC18.81■□□□□ 0.6
OPN1SWP03999 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
OPN1SWP03999 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.81■□□□□ 0.6
OPN1SWP03999 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
OPN1SWP03999 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.81■□□□□ 0.6
OPN1SWP03999 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.8■□□□□ 0.6
OPN1SWP03999 AC019069.1-201ENST00000610008 1333 ntBASIC18.8■□□□□ 0.6
OPN1SWP03999 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.8■□□□□ 0.6
OPN1SWP03999 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 AL691432.2-201ENST00000607222 2038 ntBASIC18.8■□□□□ 0.6
OPN1SWP03999 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.8■□□□□ 0.6
OPN1SWP03999 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.8■□□□□ 0.6
OPN1SWP03999 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
OPN1SWP03999 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
OPN1SWP03999 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPN1SWP03999 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.79■□□□□ 0.6
OPN1SWP03999 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
OPN1SWP03999 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
OPN1SWP03999 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
OPN1SWP03999 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.79■□□□□ 0.6
OPN1SWP03999 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
OPN1SWP03999 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.79■□□□□ 0.6
OPN1SWP03999 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.79■□□□□ 0.6
OPN1SWP03999 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.79■□□□□ 0.6
OPN1SWP03999 KRT18P61-201ENST00000585825 1298 ntBASIC18.79■□□□□ 0.6
OPN1SWP03999 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.79■□□□□ 0.6
OPN1SWP03999 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.79■□□□□ 0.6
OPN1SWP03999 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.79■□□□□ 0.6
OPN1SWP03999 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.79■□□□□ 0.6
OPN1SWP03999 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
OPN1SWP03999 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
OPN1SWP03999 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
OPN1SWP03999 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPN1SWP03999 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
OPN1SWP03999 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.78■□□□□ 0.6
OPN1SWP03999 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.78■□□□□ 0.6
OPN1SWP03999 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
OPN1SWP03999 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
OPN1SWP03999 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
OPN1SWP03999 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
OPN1SWP03999 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.78■□□□□ 0.6
OPN1SWP03999 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.78■□□□□ 0.6
OPN1SWP03999 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.78■□□□□ 0.6
OPN1SWP03999 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.78■□□□□ 0.6
OPN1SWP03999 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.78■□□□□ 0.6
OPN1SWP03999 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.78■□□□□ 0.6
OPN1SWP03999 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.78■□□□□ 0.6
OPN1SWP03999 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.78■□□□□ 0.6
OPN1SWP03999 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.78■□□□□ 0.6
OPN1SWP03999 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
OPN1SWP03999 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.78■□□□□ 0.6
OPN1SWP03999 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPN1SWP03999 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms