Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.75■■□□□ 1.39
COL2A1P02458 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
COL2A1P02458 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL2A1P02458 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.75■■□□□ 1.39
COL2A1P02458 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.75■■□□□ 1.39
COL2A1P02458 AF186192.3-201ENST00000583427 947 ntBASIC23.75■■□□□ 1.39
COL2A1P02458 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.75■■□□□ 1.39
COL2A1P02458 AL353708.3-201ENST00000610272 989 ntBASIC23.75■■□□□ 1.39
COL2A1P02458 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL2A1P02458 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL2A1P02458 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
COL2A1P02458 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL2A1P02458 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL2A1P02458 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.74■■□□□ 1.39
COL2A1P02458 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
COL2A1P02458 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL2A1P02458 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.74■■□□□ 1.39
COL2A1P02458 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL2A1P02458 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.74■■□□□ 1.39
COL2A1P02458 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.74■■□□□ 1.39
COL2A1P02458 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.74■■□□□ 1.39
COL2A1P02458 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.74■■□□□ 1.39
COL2A1P02458 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL2A1P02458 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL2A1P02458 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL2A1P02458 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL2A1P02458 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL2A1P02458 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL2A1P02458 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL2A1P02458 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
COL2A1P02458 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.73■■□□□ 1.39
COL2A1P02458 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL2A1P02458 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
COL2A1P02458 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL2A1P02458 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
COL2A1P02458 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.73■■□□□ 1.39
COL2A1P02458 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.73■■□□□ 1.39
COL2A1P02458 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.73■■□□□ 1.39
COL2A1P02458 LINC01023-201ENST00000606054 436 ntBASIC23.73■■□□□ 1.39
COL2A1P02458 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.73■■□□□ 1.39
COL2A1P02458 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL2A1P02458 AC133561.1-201ENST00000568600 2415 ntBASIC23.72■■□□□ 1.39
COL2A1P02458 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL2A1P02458 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.72■■□□□ 1.39
COL2A1P02458 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL2A1P02458 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.72■■□□□ 1.39
COL2A1P02458 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL2A1P02458 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
COL2A1P02458 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
COL2A1P02458 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
COL2A1P02458 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.72■■□□□ 1.39
COL2A1P02458 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL2A1P02458 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL2A1P02458 HTR7P1-201ENST00000538670 1336 ntBASIC23.71■■□□□ 1.39
COL2A1P02458 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.71■■□□□ 1.39
COL2A1P02458 AL121603.2-201ENST00000557373 2117 ntBASIC23.71■■□□□ 1.39
COL2A1P02458 PLK5-205ENST00000642079 1969 ntBASIC23.71■■□□□ 1.39
COL2A1P02458 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL2A1P02458 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL2A1P02458 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.71■■□□□ 1.39
COL2A1P02458 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.71■■□□□ 1.39
COL2A1P02458 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
COL2A1P02458 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.71■■□□□ 1.39
COL2A1P02458 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.71■■□□□ 1.39
COL2A1P02458 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.71■■□□□ 1.39
COL2A1P02458 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL2A1P02458 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL2A1P02458 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL2A1P02458 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL2A1P02458 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.71■■□□□ 1.39
COL2A1P02458 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL2A1P02458 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COL2A1P02458 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COL2A1P02458 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
COL2A1P02458 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.7■■□□□ 1.38
COL2A1P02458 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.7■■□□□ 1.38
COL2A1P02458 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL2A1P02458 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
COL2A1P02458 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COL2A1P02458 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL2A1P02458 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.7■■□□□ 1.38
COL2A1P02458 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.7■■□□□ 1.38
COL2A1P02458 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL2A1P02458 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
COL2A1P02458 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL2A1P02458 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.69■■□□□ 1.38
COL2A1P02458 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL2A1P02458 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.69■■□□□ 1.38
COL2A1P02458 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL2A1P02458 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL2A1P02458 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.69■■□□□ 1.38
COL2A1P02458 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.69■■□□□ 1.38
COL2A1P02458 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
COL2A1P02458 AC026471.5-201ENST00000615068 467 ntBASIC23.69■■□□□ 1.38
COL2A1P02458 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL2A1P02458 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL2A1P02458 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL2A1P02458 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.69■■□□□ 1.38
COL2A1P02458 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL2A1P02458 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms