Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN1O95832 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN1O95832 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN1O95832 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN1O95832 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.02■□□□□ 0.48
CLDN1O95832 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN1O95832 AC007375.3-201ENST00000600936 2314 ntBASIC18.02■□□□□ 0.48
CLDN1O95832 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLDN1O95832 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CLDN1O95832 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN1O95832 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLDN1O95832 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.02■□□□□ 0.47
CLDN1O95832 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.02■□□□□ 0.47
CLDN1O95832 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN1O95832 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN1O95832 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN1O95832 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN1O95832 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN1O95832 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLDN1O95832 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN1O95832 C11orf96-202ENST00000528572 1834 ntBASIC18.01■□□□□ 0.47
CLDN1O95832 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN1O95832 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLDN1O95832 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLDN1O95832 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLDN1O95832 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.01■□□□□ 0.47
CLDN1O95832 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.01■□□□□ 0.47
CLDN1O95832 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.01■□□□□ 0.47
CLDN1O95832 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN1O95832 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CLDN1O95832 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CLDN1O95832 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN1O95832 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLDN1O95832 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18■□□□□ 0.47
CLDN1O95832 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN1O95832 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLDN1O95832 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18■□□□□ 0.47
CLDN1O95832 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18■□□□□ 0.47
CLDN1O95832 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN1O95832 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN1O95832 KRT8P9-201ENST00000558927 1449 ntBASIC18■□□□□ 0.47
CLDN1O95832 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18■□□□□ 0.47
CLDN1O95832 AC003102.1-202ENST00000563394 1796 ntBASIC18■□□□□ 0.47
CLDN1O95832 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18■□□□□ 0.47
CLDN1O95832 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18■□□□□ 0.47
CLDN1O95832 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18■□□□□ 0.47
CLDN1O95832 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLDN1O95832 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18■□□□□ 0.47
CLDN1O95832 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18■□□□□ 0.47
CLDN1O95832 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLDN1O95832 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLDN1O95832 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18■□□□□ 0.47
CLDN1O95832 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
CLDN1O95832 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLDN1O95832 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN1O95832 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN1O95832 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN1O95832 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN1O95832 AC113347.1-201ENST00000413321 391 ntBASIC17.99■□□□□ 0.47
CLDN1O95832 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.99■□□□□ 0.47
CLDN1O95832 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.99■□□□□ 0.47
CLDN1O95832 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN1O95832 AC005829.2-201ENST00000571422 1056 ntBASIC17.99■□□□□ 0.47
CLDN1O95832 NTF6B-201ENST00000591913 560 ntBASIC17.99■□□□□ 0.47
CLDN1O95832 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.99■□□□□ 0.47
CLDN1O95832 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CLDN1O95832 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN1O95832 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLDN1O95832 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLDN1O95832 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLDN1O95832 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN1O95832 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN1O95832 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLDN1O95832 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN1O95832 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CLDN1O95832 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
CLDN1O95832 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.98■□□□□ 0.47
CLDN1O95832 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CLDN1O95832 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN1O95832 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN1O95832 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN1O95832 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.98■□□□□ 0.47
CLDN1O95832 AF186192.3-201ENST00000583427 947 ntBASIC17.98■□□□□ 0.47
CLDN1O95832 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.98■□□□□ 0.47
CLDN1O95832 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN1O95832 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLDN1O95832 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLDN1O95832 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.98■□□□□ 0.47
CLDN1O95832 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms