Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PTP4A3O75365 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
PTP4A3O75365 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A3O75365 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.18■□□□□ 0.5
PTP4A3O75365 AL162412.1-201ENST00000567129 965 ntBASIC18.18■□□□□ 0.5
PTP4A3O75365 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.18■□□□□ 0.5
PTP4A3O75365 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.18■□□□□ 0.5
PTP4A3O75365 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
PTP4A3O75365 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A3O75365 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.18■□□□□ 0.5
PTP4A3O75365 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A3O75365 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A3O75365 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A3O75365 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A3O75365 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.18■□□□□ 0.5
PTP4A3O75365 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.18■□□□□ 0.5
PTP4A3O75365 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.18■□□□□ 0.5
PTP4A3O75365 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PTP4A3O75365 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTP4A3O75365 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 PGM5P4-201ENST00000421970 445 ntBASIC18.17■□□□□ 0.5
PTP4A3O75365 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.17■□□□□ 0.5
PTP4A3O75365 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PTP4A3O75365 AC034268.1-201ENST00000441047 882 ntBASIC18.17■□□□□ 0.5
PTP4A3O75365 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.17■□□□□ 0.5
PTP4A3O75365 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.17■□□□□ 0.5
PTP4A3O75365 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PTP4A3O75365 CYP21A1P-202ENST00000354927 1481 ntBASIC18.17■□□□□ 0.5
PTP4A3O75365 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PTP4A3O75365 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.17■□□□□ 0.5
PTP4A3O75365 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTP4A3O75365 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.16■□□□□ 0.5
PTP4A3O75365 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.16■□□□□ 0.5
PTP4A3O75365 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.16■□□□□ 0.5
PTP4A3O75365 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTP4A3O75365 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTP4A3O75365 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTP4A3O75365 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PTP4A3O75365 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.16■□□□□ 0.5
PTP4A3O75365 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTP4A3O75365 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PTP4A3O75365 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTP4A3O75365 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTP4A3O75365 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTP4A3O75365 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTP4A3O75365 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTP4A3O75365 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTP4A3O75365 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTP4A3O75365 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTP4A3O75365 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
PTP4A3O75365 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PTP4A3O75365 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTP4A3O75365 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.15■□□□□ 0.5
PTP4A3O75365 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.15■□□□□ 0.5
PTP4A3O75365 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTP4A3O75365 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.15■□□□□ 0.5
PTP4A3O75365 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTP4A3O75365 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PTP4A3O75365 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PTP4A3O75365 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.15■□□□□ 0.5
PTP4A3O75365 AC007322.4-201ENST00000509611 723 ntBASIC18.15■□□□□ 0.5
PTP4A3O75365 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTP4A3O75365 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTP4A3O75365 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTP4A3O75365 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PTP4A3O75365 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTP4A3O75365 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTP4A3O75365 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.15■□□□□ 0.5
PTP4A3O75365 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTP4A3O75365 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTP4A3O75365 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.14■□□□□ 0.5
PTP4A3O75365 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PTP4A3O75365 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.14■□□□□ 0.5
PTP4A3O75365 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PTP4A3O75365 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A3O75365 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A3O75365 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.14■□□□□ 0.49
PTP4A3O75365 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.14■□□□□ 0.49
PTP4A3O75365 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A3O75365 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A3O75365 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A3O75365 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A3O75365 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.14■□□□□ 0.49
PTP4A3O75365 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.14■□□□□ 0.49
PTP4A3O75365 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.14■□□□□ 0.49
PTP4A3O75365 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.14■□□□□ 0.49
PTP4A3O75365 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.14■□□□□ 0.49
PTP4A3O75365 AC016405.3-201ENST00000607710 860 ntBASIC18.14■□□□□ 0.49
PTP4A3O75365 MIR6821-201ENST00000617625 74 ntBASIC18.14■□□□□ 0.49
PTP4A3O75365 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTP4A3O75365 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms