Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM13O60858 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM13O60858 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRIM13O60858 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.83■□□□□ 0.77
TRIM13O60858 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.83■□□□□ 0.77
TRIM13O60858 FAM21FP-204ENST00000608637 956 ntBASIC19.83■□□□□ 0.77
TRIM13O60858 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM13O60858 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.83■□□□□ 0.76
TRIM13O60858 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM13O60858 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM13O60858 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRIM13O60858 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
TRIM13O60858 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM13O60858 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM13O60858 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM13O60858 AC018445.3-201ENST00000624177 1945 ntBASIC19.82■□□□□ 0.76
TRIM13O60858 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM13O60858 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRIM13O60858 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM13O60858 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM13O60858 AC105265.2-201ENST00000467189 838 ntBASIC19.82■□□□□ 0.76
TRIM13O60858 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.82■□□□□ 0.76
TRIM13O60858 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM13O60858 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.82■□□□□ 0.76
TRIM13O60858 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.82■□□□□ 0.76
TRIM13O60858 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM13O60858 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRIM13O60858 BX323043.1-201ENST00000641006 1765 ntBASIC19.82■□□□□ 0.76
TRIM13O60858 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM13O60858 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM13O60858 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM13O60858 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRIM13O60858 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM13O60858 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM13O60858 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM13O60858 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM13O60858 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM13O60858 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM13O60858 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM13O60858 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM13O60858 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TRIM13O60858 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM13O60858 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
TRIM13O60858 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM13O60858 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM13O60858 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM13O60858 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.81■□□□□ 0.76
TRIM13O60858 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
TRIM13O60858 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.81■□□□□ 0.76
TRIM13O60858 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.81■□□□□ 0.76
TRIM13O60858 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM13O60858 SLC7A5P1-201ENST00000568957 537 ntBASIC19.81■□□□□ 0.76
TRIM13O60858 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM13O60858 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM13O60858 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM13O60858 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM13O60858 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM13O60858 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM13O60858 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM13O60858 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM13O60858 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRIM13O60858 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM13O60858 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM13O60858 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TRIM13O60858 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM13O60858 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM13O60858 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM13O60858 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM13O60858 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM13O60858 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM13O60858 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM13O60858 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM13O60858 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM13O60858 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM13O60858 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM13O60858 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM13O60858 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM13O60858 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM13O60858 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM13O60858 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM13O60858 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM13O60858 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM13O60858 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM13O60858 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM13O60858 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM13O60858 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM13O60858 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms