Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 IFNL4P1-201ENST00000607083 540 ntBASIC22.25■■□□□ 1.15
TNRC18O15417 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNRC18O15417 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNRC18O15417 HOMER2P1-201ENST00000455653 964 ntBASIC22.24■■□□□ 1.15
TNRC18O15417 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.24■■□□□ 1.15
TNRC18O15417 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.24■■□□□ 1.15
TNRC18O15417 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNRC18O15417 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.24■■□□□ 1.15
TNRC18O15417 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.24■■□□□ 1.15
TNRC18O15417 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
TNRC18O15417 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.24■■□□□ 1.15
TNRC18O15417 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TNRC18O15417 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNRC18O15417 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNRC18O15417 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNRC18O15417 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
TNRC18O15417 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.23■■□□□ 1.15
TNRC18O15417 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TNRC18O15417 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.23■■□□□ 1.15
TNRC18O15417 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
TNRC18O15417 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC22.23■■□□□ 1.15
TNRC18O15417 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TNRC18O15417 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TNRC18O15417 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TNRC18O15417 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.23■■□□□ 1.15
TNRC18O15417 MIR3180-1-201ENST00000580374 94 ntBASIC22.23■■□□□ 1.15
TNRC18O15417 MIR3180-3-201ENST00000584616 94 ntBASIC22.23■■□□□ 1.15
TNRC18O15417 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC22.23■■□□□ 1.15
TNRC18O15417 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNRC18O15417 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
TNRC18O15417 FAM220CP-201ENST00000395253 831 ntBASIC22.22■■□□□ 1.15
TNRC18O15417 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC22.22■■□□□ 1.15
TNRC18O15417 KRT18P38-201ENST00000449496 1282 ntBASIC22.22■■□□□ 1.15
TNRC18O15417 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.22■■□□□ 1.15
TNRC18O15417 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.22■■□□□ 1.15
TNRC18O15417 NME4-212ENST00000621774 904 ntTSL 3 BASIC22.22■■□□□ 1.15
TNRC18O15417 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TNRC18O15417 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNRC18O15417 MIR574-201ENST00000385209 96 ntBASIC22.22■■□□□ 1.15
TNRC18O15417 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNRC18O15417 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.22■■□□□ 1.15
TNRC18O15417 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.22■■□□□ 1.15
TNRC18O15417 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.22■■□□□ 1.15
TNRC18O15417 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.22■■□□□ 1.15
TNRC18O15417 ABCB10P4-201ENST00000566803 2184 ntBASIC22.22■■□□□ 1.15
TNRC18O15417 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC18O15417 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.21■■□□□ 1.15
TNRC18O15417 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.21■■□□□ 1.15
TNRC18O15417 AP002469.2-201ENST00000531724 424 ntBASIC22.21■■□□□ 1.15
TNRC18O15417 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC18O15417 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC18O15417 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC18O15417 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC18O15417 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC22.21■■□□□ 1.15
TNRC18O15417 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.21■■□□□ 1.15
TNRC18O15417 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC18O15417 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC18O15417 KRT8P8-201ENST00000434750 1448 ntBASIC22.21■■□□□ 1.15
TNRC18O15417 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.2■■□□□ 1.15
TNRC18O15417 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.15
TNRC18O15417 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TNRC18O15417 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.2■■□□□ 1.14
TNRC18O15417 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNRC18O15417 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC22.2■■□□□ 1.14
TNRC18O15417 AL441883.1-201ENST00000566170 1045 ntBASIC22.2■■□□□ 1.14
TNRC18O15417 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNRC18O15417 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.2■■□□□ 1.14
TNRC18O15417 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNRC18O15417 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNRC18O15417 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNRC18O15417 AC116050.2-201ENST00000612102 1779 ntBASIC22.2■■□□□ 1.14
TNRC18O15417 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.2■■□□□ 1.14
TNRC18O15417 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.2■■□□□ 1.14
TNRC18O15417 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
TNRC18O15417 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.19■■□□□ 1.14
TNRC18O15417 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC18O15417 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.19■■□□□ 1.14
TNRC18O15417 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
TNRC18O15417 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC18O15417 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC18O15417 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC22.19■■□□□ 1.14
TNRC18O15417 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.19■■□□□ 1.14
TNRC18O15417 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.19■■□□□ 1.14
TNRC18O15417 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC18O15417 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC18O15417 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC18O15417 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.19■■□□□ 1.14
TNRC18O15417 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.19■■□□□ 1.14
TNRC18O15417 AL160237.2-201ENST00000556165 472 ntBASIC22.19■■□□□ 1.14
TNRC18O15417 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC22.19■■□□□ 1.14
TNRC18O15417 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
TNRC18O15417 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC18O15417 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.18■■□□□ 1.14
TNRC18O15417 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC18O15417 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC18O15417 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC18O15417 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC18O15417 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TNRC18O15417 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC18O15417 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms