Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CLDN5O00501 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN5O00501 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN5O00501 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.32■■□□□ 1
CLDN5O00501 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN5O00501 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.31■■□□□ 1
CLDN5O00501 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.31■■□□□ 1
CLDN5O00501 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
CLDN5O00501 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.31■■□□□ 1
CLDN5O00501 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLDN5O00501 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 KRT18P29-201ENST00000397031 1267 ntBASIC21.31■■□□□ 1
CLDN5O00501 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.31■■□□□ 1
CLDN5O00501 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.31■■□□□ 1
CLDN5O00501 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CLDN5O00501 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.31■■□□□ 1
CLDN5O00501 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.31■■□□□ 1
CLDN5O00501 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLDN5O00501 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN5O00501 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.3■■□□□ 1
CLDN5O00501 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.3■■□□□ 1
CLDN5O00501 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.3■■□□□ 1
CLDN5O00501 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN5O00501 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.3■■□□□ 1
CLDN5O00501 PRORSD1P-201ENST00000295112 541 ntBASIC21.3■■□□□ 1
CLDN5O00501 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN5O00501 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN5O00501 AC128676.1-201ENST00000454392 318 ntBASIC21.3■■□□□ 1
CLDN5O00501 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.3■■□□□ 1
CLDN5O00501 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.3■■□□□ 1
CLDN5O00501 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CLDN5O00501 AC233263.1-201ENST00000578059 224 ntBASIC21.3■■□□□ 1
CLDN5O00501 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.3■■□□□ 1
CLDN5O00501 AC073314.1-201ENST00000568729 2216 ntBASIC21.3■■□□□ 1
CLDN5O00501 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CLDN5O00501 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN5O00501 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN5O00501 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.29■■□□□ 1
CLDN5O00501 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.29■■□□□ 1
CLDN5O00501 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.29■■□□□ 1
CLDN5O00501 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
CLDN5O00501 AC073648.6-201ENST00000641589 218 ntBASIC21.29■■□□□ 1
CLDN5O00501 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.29■■□□□ 1
CLDN5O00501 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 SMG8-203ENST00000578922 2178 ntBASIC21.29■■□□□ 1
CLDN5O00501 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN5O00501 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.28■■□□□ 1
CLDN5O00501 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.28■■□□□ 1
CLDN5O00501 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.28■■□□□ 1
CLDN5O00501 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.28■■□□□ 1
CLDN5O00501 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CLDN5O00501 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.28■■□□□ 1
CLDN5O00501 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.28■■□□□ 1
CLDN5O00501 AC008687.6-201ENST00000596318 630 ntBASIC21.28■■□□□ 1
CLDN5O00501 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.28■■□□□ 1
CLDN5O00501 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.28■■□□□ 1
CLDN5O00501 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CLDN5O00501 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CLDN5O00501 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLDN5O00501 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN5O00501 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.27■■□□□ 1
CLDN5O00501 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN5O00501 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CLDN5O00501 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN5O00501 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.27■■□□□ 1
CLDN5O00501 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms