Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC33A1O00400 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC33A1O00400 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC33A1O00400 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC33A1O00400 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC33A1O00400 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SLC33A1O00400 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SLC33A1O00400 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC33A1O00400 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.18■□□□□ 0.34
SLC33A1O00400 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC33A1O00400 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC33A1O00400 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC33A1O00400 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC33A1O00400 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
SLC33A1O00400 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC33A1O00400 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC33A1O00400 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SLC33A1O00400 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC33A1O00400 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC33A1O00400 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC33A1O00400 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC33A1O00400 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC33A1O00400 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SLC33A1O00400 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC33A1O00400 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC33A1O00400 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.17■□□□□ 0.34
SLC33A1O00400 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC33A1O00400 AC087623.3-201ENST00000607047 1098 ntBASIC17.17■□□□□ 0.34
SLC33A1O00400 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC33A1O00400 MYCNOS-205ENST00000641950 531 ntBASIC17.17■□□□□ 0.34
SLC33A1O00400 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC33A1O00400 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC33A1O00400 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC33A1O00400 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC33A1O00400 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SLC33A1O00400 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC33A1O00400 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
SLC33A1O00400 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC33A1O00400 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC33A1O00400 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC33A1O00400 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC33A1O00400 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC33A1O00400 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC33A1O00400 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SLC33A1O00400 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC33A1O00400 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 AC007322.3-201ENST00000426526 701 ntBASIC17.16■□□□□ 0.34
SLC33A1O00400 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC33A1O00400 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC33A1O00400 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SLC33A1O00400 MIR2861-201ENST00000636310 90 ntBASIC17.16■□□□□ 0.34
SLC33A1O00400 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC33A1O00400 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC33A1O00400 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC33A1O00400 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC33A1O00400 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC33A1O00400 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC33A1O00400 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC33A1O00400 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC33A1O00400 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC33A1O00400 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC33A1O00400 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLC33A1O00400 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SLC33A1O00400 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC33A1O00400 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.15■□□□□ 0.34
SLC33A1O00400 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.15■□□□□ 0.34
SLC33A1O00400 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC33A1O00400 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
SLC33A1O00400 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SLC33A1O00400 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC33A1O00400 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC33A1O00400 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC33A1O00400 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms