Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC7O00311 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.81■□□□□ 0.76
CDC7O00311 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC7O00311 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CDC7O00311 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC7O00311 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CDC7O00311 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC7O00311 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC7O00311 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDC7O00311 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC7O00311 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDC7O00311 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
CDC7O00311 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC7O00311 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.8■□□□□ 0.76
CDC7O00311 AC007322.1-201ENST00000426983 750 ntBASIC19.8■□□□□ 0.76
CDC7O00311 IKBKGP1-201ENST00000612193 1073 ntBASIC19.8■□□□□ 0.76
CDC7O00311 AC092437.1-201ENST00000624794 1048 ntBASIC19.8■□□□□ 0.76
CDC7O00311 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC7O00311 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.8■□□□□ 0.76
CDC7O00311 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.8■□□□□ 0.76
CDC7O00311 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC7O00311 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC7O00311 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC7O00311 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC7O00311 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDC7O00311 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.79■□□□□ 0.76
CDC7O00311 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDC7O00311 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 MCRIP2P1-201ENST00000394346 511 ntBASIC19.79■□□□□ 0.76
CDC7O00311 AC004911.1-201ENST00000416316 871 ntBASIC19.79■□□□□ 0.76
CDC7O00311 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.79■□□□□ 0.76
CDC7O00311 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.79■□□□□ 0.76
CDC7O00311 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.79■□□□□ 0.76
CDC7O00311 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.79■□□□□ 0.76
CDC7O00311 AC231657.2-201ENST00000624556 255 ntBASIC19.79■□□□□ 0.76
CDC7O00311 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.79■□□□□ 0.76
CDC7O00311 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.79■□□□□ 0.76
CDC7O00311 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC7O00311 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDC7O00311 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDC7O00311 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC7O00311 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.79■□□□□ 0.76
CDC7O00311 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDC7O00311 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC7O00311 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC7O00311 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.78■□□□□ 0.76
CDC7O00311 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC7O00311 AC100791.3-201ENST00000617619 330 ntBASIC19.78■□□□□ 0.76
CDC7O00311 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC7O00311 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC7O00311 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC7O00311 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC7O00311 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDC7O00311 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC7O00311 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDC7O00311 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC7O00311 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC7O00311 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDC7O00311 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CDC7O00311 AL355472.2-201ENST00000422958 438 ntBASIC19.77■□□□□ 0.76
CDC7O00311 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.77■□□□□ 0.76
CDC7O00311 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDC7O00311 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.77■□□□□ 0.76
CDC7O00311 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.77■□□□□ 0.76
CDC7O00311 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDC7O00311 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.77■□□□□ 0.76
CDC7O00311 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.77■□□□□ 0.76
CDC7O00311 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.77■□□□□ 0.76
CDC7O00311 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDC7O00311 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.76■□□□□ 0.75
CDC7O00311 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC7O00311 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDC7O00311 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDC7O00311 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.76■□□□□ 0.75
CDC7O00311 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.76■□□□□ 0.75
CDC7O00311 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDC7O00311 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.76■□□□□ 0.75
CDC7O00311 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDC7O00311 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.76■□□□□ 0.75
CDC7O00311 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.76■□□□□ 0.75
CDC7O00311 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDC7O00311 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.76■□□□□ 0.75
CDC7O00311 AC069236.1-201ENST00000604339 616 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms