Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
H3BM21 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H3BM21 SLC25A24-204ENST00000569674 2357 ntBASIC20.07■□□□□ 0.8
H3BM21 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.07■□□□□ 0.8
H3BM21 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.07■□□□□ 0.8
H3BM21 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H3BM21 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.07■□□□□ 0.8
H3BM21 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H3BM21 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.07■□□□□ 0.8
H3BM21 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.07■□□□□ 0.8
H3BM21 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H3BM21 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.07■□□□□ 0.8
H3BM21 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
H3BM21 C1QBPP2-201ENST00000528754 825 ntBASIC20.07■□□□□ 0.8
H3BM21 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.07■□□□□ 0.8
H3BM21 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
H3BM21 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.07■□□□□ 0.8
H3BM21 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H3BM21 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
H3BM21 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H3BM21 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H3BM21 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.07■□□□□ 0.8
H3BM21 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H3BM21 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
H3BM21 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.06■□□□□ 0.8
H3BM21 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H3BM21 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
H3BM21 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
H3BM21 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
H3BM21 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.06■□□□□ 0.8
H3BM21 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.06■□□□□ 0.8
H3BM21 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.06■□□□□ 0.8
H3BM21 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
H3BM21 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
H3BM21 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.06■□□□□ 0.8
H3BM21 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
H3BM21 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.06■□□□□ 0.8
H3BM21 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
H3BM21 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.05■□□□□ 0.8
H3BM21 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.05■□□□□ 0.8
H3BM21 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.05■□□□□ 0.8
H3BM21 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.05■□□□□ 0.8
H3BM21 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
H3BM21 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.05■□□□□ 0.8
H3BM21 AC069544.1-201ENST00000609399 999 ntBASIC20.05■□□□□ 0.8
H3BM21 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 AL356652.1-201ENST00000615962 565 ntBASIC20.05■□□□□ 0.8
H3BM21 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.05■□□□□ 0.8
H3BM21 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
H3BM21 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.05■□□□□ 0.8
H3BM21 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
H3BM21 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H3BM21 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.04■□□□□ 0.8
H3BM21 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
H3BM21 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 MIR718-201ENST00000390190 70 ntBASIC20.04■□□□□ 0.8
H3BM21 POM121L13P-201ENST00000422362 380 ntBASIC20.04■□□□□ 0.8
H3BM21 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.04■□□□□ 0.8
H3BM21 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.04■□□□□ 0.8
H3BM21 RPPH1-201ENST00000516869 333 ntBASIC20.04■□□□□ 0.8
H3BM21 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.04■□□□□ 0.8
H3BM21 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.04■□□□□ 0.8
H3BM21 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.04■□□□□ 0.8
H3BM21 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.04■□□□□ 0.8
H3BM21 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
H3BM21 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
H3BM21 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.04■□□□□ 0.8
H3BM21 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.04■□□□□ 0.8
H3BM21 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
H3BM21 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3BM21 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.03■□□□□ 0.8
H3BM21 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.03■□□□□ 0.8
H3BM21 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
H3BM21 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
H3BM21 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms