Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 RNA5SP413-201ENST00000516373 109 ntBASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AC010980.2-201ENST00000587099 1412 ntBASIC16.19■□□□□ 0.18
TCRBV4S1A1TA0A5B7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AC097658.1-201ENST00000475555 843 ntBASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FP700111.2-201ENST00000619190 1892 ntBASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 LSM12P1-201ENST00000411836 588 ntBASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRBV4S1A1TA0A5B7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRBV4S1A1TA0A5B7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms