Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 KRT16P5-201ENST00000455284 522 ntBASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 NBPF21P-201ENST00000425093 1451 ntBASIC18.33■□□□□ 0.52
TRAV17A0A0B4J275 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 AL353807.1-201ENST00000427475 662 ntBASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV17A0A0B4J275 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV17A0A0B4J275 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 AL024507.2-201ENST00000606070 2574 ntBASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 AC004264.1-201ENST00000608354 794 ntBASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV17A0A0B4J275 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 AC012676.1-201ENST00000574705 1949 ntBASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 HTR7P1-201ENST00000538670 1336 ntBASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 AC124283.5-201ENST00000624661 1809 ntBASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV17A0A0B4J275 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms