Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV10A0A0B4J240 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 PRKY-204ENST00000533551 1019 ntBASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 KRT8P36-201ENST00000489121 1440 ntBASIC14.24□□□□□ -0.13
TRAV10A0A0B4J240 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 AC239809.2-201ENST00000415381 517 ntBASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 AC233263.1-201ENST00000578059 224 ntBASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV10A0A0B4J240 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 EP400NL-214ENST00000641289 2402 ntBASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 AC023632.3-201ENST00000521633 145 ntBASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV10A0A0B4J240 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms