Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 AC105036.2-201ENST00000569468 176 ntBASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 AL050303.2-201ENST00000619798 666 ntBASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV2A0A0B4J234 MKRN4P-201ENST00000444706 1521 ntBASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 NCF1B-203ENST00000435988 1254 ntBASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 GABARAPL3-202ENST00000624044 1851 ntBASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV2A0A0B4J234 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 AC093787.1-201ENST00000450396 207 ntBASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV2A0A0B4J234 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV2A0A0B4J234 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TRAV2A0A0B4J234 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV2A0A0B4J234 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 AC092667.1-201ENST00000434301 2586 ntBASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 GPX1P1-201ENST00000388829 606 ntBASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 SLC29A4P1-201ENST00000398760 971 ntBASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV2A0A0B4J234 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms