Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.87■□□□□ 0.29
TRBV6-7A0A0A0MS04 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 AC005332.7-201ENST00000614046 2005 ntBASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 AC123595.1-201ENST00000440769 1046 ntBASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 AC243732.1-201ENST00000612648 864 ntBASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 AC026471.1-201ENST00000564629 3026 ntBASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-7A0A0A0MS04 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-7A0A0A0MS04 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 TERF1P2-201ENST00000583350 1212 ntBASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-7A0A0A0MS04 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.83■□□□□ 0.29
TRBV6-7A0A0A0MS04 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRBV6-7A0A0A0MS04 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
TRBV6-7A0A0A0MS04 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-7A0A0A0MS04 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms