Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 UBE2DNL-204ENST00000602536 740 ntBASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
TRBV5-3A0A0A0MS03 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 MIR638-201ENST00000385237 100 ntBASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 RNF165-205ENST00000588679 2904 ntBASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 PTBP1P-201ENST00000554374 1601 ntBASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC093484.2-201ENST00000580996 2166 ntBASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRBV5-3A0A0A0MS03 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV5-3A0A0A0MS03 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 CYP21A1P-202ENST00000354927 1481 ntBASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 KRT19P1-201ENST00000405746 1186 ntBASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 PGM5P4-201ENST00000421970 445 ntBASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 MYCNOS-205ENST00000641950 531 ntBASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 AL020996.1-203ENST00000536896 2307 ntBASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
TRBV5-3A0A0A0MS03 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.62
TRBV5-3A0A0A0MS03 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 AC009237.14-201ENST00000609975 1594 ntBASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV5-3A0A0A0MS03 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV5-3A0A0A0MS03 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms