Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 AC073195.1-201ENST00000607241 877 ntBASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 FAM197Y1-201ENST00000421178 764 ntBASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 AC004264.1-201ENST00000608354 794 ntBASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC187A0A096LP49 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 AL117328.2-201ENST00000624617 1940 ntBASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 TMPOP1-202ENST00000424642 1267 ntBASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 CLDN5-201ENST00000403084 2357 ntBASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 KRT8P36-201ENST00000489121 1440 ntBASIC19.17■□□□□ 0.66
CCDC187A0A096LP49 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 AC124283.5-201ENST00000624661 1809 ntBASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 AC027702.1-201ENST00000563810 1770 ntBASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC187A0A096LP49 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 AP002982.1-201ENST00000492365 877 ntBASIC19.15■□□□□ 0.66
CCDC187A0A096LP49 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms