Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC006967.3-201ENST00000594086 1093 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC233702.11-201ENST00000598588 333 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC114810.1-201ENST00000607415 473 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 RN7SL82P-201ENST00000611435 237 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 RN7SL628P-201ENST00000619139 237 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC245041.1-201ENST00000619523 826 ntTSL 3 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 REST-209ENST00000622863 1106 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 AC007614.2-201ENST00000569877 1851 ntBASIC7.41□□□□□ -1.22
SNX18Q96RF0 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SNX18Q96RF0 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AC011379.1-201ENST00000508713 3025 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 OR2D3-201ENST00000317834 1070 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 MOSPD1-201ENST00000370777 784 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AL133406.1-201ENST00000404904 747 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 MIR1269A-201ENST00000408636 105 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AL160153.1-201ENST00000415285 429 ntTSL 3 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AL354761.1-201ENST00000434190 526 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AL441943.1-201ENST00000435539 432 ntTSL 3 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 RN7SL263P-201ENST00000467969 290 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 RN7SL77P-201ENST00000473332 294 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 RN7SL28P-201ENST00000488836 298 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 RN7SL598P-201ENST00000494391 294 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 ARL1-203ENST00000539055 1231 ntTSL 2 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 COX5AP2-201ENST00000554418 394 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AC092287.1-201ENST00000565782 463 ntTSL 3 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AC015878.2-201ENST00000584331 361 ntTSL 5 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 RPL7L1P5-201ENST00000590816 738 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AL121928.1-201ENST00000608017 521 ntBASIC7.4□□□□□ -1.22
SNX18Q96RF0 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC7.4□□□□□ -1.22
SNX18Q96RF0 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNX18Q96RF0 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
SNX18Q96RF0 EIF4BP2-201ENST00000416702 1794 ntBASIC7.4□□□□□ -1.23
SNX18Q96RF0 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC7.4□□□□□ -1.23
SNX18Q96RF0 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SNX18Q96RF0 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
SNX18Q96RF0 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms