RNA–Protein interactions for RNA: ENST00000435539.1

AL441943.1-201, humanhuman

TSL 3 BASIC

Gene AL441943.1, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL441943.1-201ENST00000435539 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
AL441943.1-201ENST00000435539 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
AL441943.1-201ENST00000435539 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
AL441943.1-201ENST00000435539 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
AL441943.1-201ENST00000435539 PLPPR3Q6T4P5 718 aa20.32■□□□□ 0.84
AL441943.1-201ENST00000435539 FOXD1Q16676 465 aa19.44■□□□□ 0.7
AL441943.1-201ENST00000435539 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
AL441943.1-201ENST00000435539 ADRA2BP18089 450 aa19.1■□□□□ 0.65
AL441943.1-201ENST00000435539 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
AL441943.1-201ENST00000435539 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
AL441943.1-201ENST00000435539 KCNA4P22459 653 aa18.07■□□□□ 0.48
AL441943.1-201ENST00000435539 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
AL441943.1-201ENST00000435539 MSH5O43196 834 aa17.79■□□□□ 0.44
AL441943.1-201ENST00000435539 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
AL441943.1-201ENST00000435539 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
AL441943.1-201ENST00000435539 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
AL441943.1-201ENST00000435539 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
AL441943.1-201ENST00000435539 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
AL441943.1-201ENST00000435539 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.36
AL441943.1-201ENST00000435539 MAPK8IP2Q13387 824 aaPredicted RBP17.17■□□□□ 0.34
AL441943.1-201ENST00000435539 CSRNP3Q8WYN3 585 aa16.9■□□□□ 0.3
AL441943.1-201ENST00000435539 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
AL441943.1-201ENST00000435539 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
AL441943.1-201ENST00000435539 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
AL441943.1-201ENST00000435539 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
AL441943.1-201ENST00000435539 HOXD11P31277 338 aaPredicted RBP16.67■□□□□ 0.26
AL441943.1-201ENST00000435539 ZBTB22O15209 634 aa16.61■□□□□ 0.25
AL441943.1-201ENST00000435539 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
AL441943.1-201ENST00000435539 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
AL441943.1-201ENST00000435539 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
AL441943.1-201ENST00000435539 ABCC9O60706 1549 aa16.11■□□□□ 0.17
AL441943.1-201ENST00000435539 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
AL441943.1-201ENST00000435539 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
AL441943.1-201ENST00000435539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
AL441943.1-201ENST00000435539 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
AL441943.1-201ENST00000435539 DCAF8L2P0C7V8 631 aa15.92■□□□□ 0.14
AL441943.1-201ENST00000435539 MYO15BQ96JP2 1530 aa15.91■□□□□ 0.14
AL441943.1-201ENST00000435539 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
AL441943.1-201ENST00000435539 NACADO15069 1562 aa15.84■□□□□ 0.13
AL441943.1-201ENST00000435539 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
AL441943.1-201ENST00000435539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.72■□□□□ 0.11
AL441943.1-201ENST00000435539 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
AL441943.1-201ENST00000435539 U3KPZ7 1027 aaPredicted RBP15.71■□□□□ 0.11
AL441943.1-201ENST00000435539 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
AL441943.1-201ENST00000435539 ATF5Q9Y2D1 282 aaPredicted RBP15.55■□□□□ 0.08
AL441943.1-201ENST00000435539 APLP2Q06481 763 aa15.47■□□□□ 0.07
AL441943.1-201ENST00000435539 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
AL441943.1-201ENST00000435539 FKBP8Q14318 412 aa15.32■□□□□ 0.04
AL441943.1-201ENST00000435539 SCRIBQ14160 1630 aa15.32■□□□□ 0.04
AL441943.1-201ENST00000435539 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
AL441943.1-201ENST00000435539 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
AL441943.1-201ENST00000435539 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
AL441943.1-201ENST00000435539 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
AL441943.1-201ENST00000435539 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
AL441943.1-201ENST00000435539 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
AL441943.1-201ENST00000435539 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
AL441943.1-201ENST00000435539 BICRAQ9NZM4 1560 aa15.12■□□□□ 0.01
AL441943.1-201ENST00000435539 CAPN15O75808 1086 aa15.11■□□□□ 0.01
AL441943.1-201ENST00000435539 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
AL441943.1-201ENST00000435539 POLA2Q14181 598 aa14.96□□□□□ -0.01
AL441943.1-201ENST00000435539 FBLN2P98095 1184 aa14.95□□□□□ -0.02
AL441943.1-201ENST00000435539 MKRN4PQ13434 485 aaPredicted RBP14.9□□□□□ -0.02
AL441943.1-201ENST00000435539 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
AL441943.1-201ENST00000435539 ABCB7O75027 752 aa14.85□□□□□ -0.03
AL441943.1-201ENST00000435539 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
AL441943.1-201ENST00000435539 ZBTB12Q9Y330 459 aaPredicted RBP14.8□□□□□ -0.04
AL441943.1-201ENST00000435539 AMER1Q5JTC6 1135 aaPredicted RBP14.79□□□□□ -0.04
AL441943.1-201ENST00000435539 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
AL441943.1-201ENST00000435539 EIF4G1Q04637 1599 aaKnown RBP14.77□□□□□ -0.05
AL441943.1-201ENST00000435539 RTN4Q9NQC3 1192 aaKnown RBP14.74□□□□□ -0.05
AL441943.1-201ENST00000435539 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
AL441943.1-201ENST00000435539 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
AL441943.1-201ENST00000435539 MROH2BQ7Z745 1585 aa14.68□□□□□ -0.06
AL441943.1-201ENST00000435539 DSG3P32926 999 aa14.68□□□□□ -0.06
AL441943.1-201ENST00000435539 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
AL441943.1-201ENST00000435539 FBXO3Q9UK99 471 aa14.65□□□□□ -0.06
AL441943.1-201ENST00000435539 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
AL441943.1-201ENST00000435539 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
AL441943.1-201ENST00000435539 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
AL441943.1-201ENST00000435539 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
AL441943.1-201ENST00000435539 PROM2Q8N271 834 aa14.6□□□□□ -0.07
AL441943.1-201ENST00000435539 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
AL441943.1-201ENST00000435539 CACNB1Q02641 598 aaPredicted RBP14.57□□□□□ -0.08
AL441943.1-201ENST00000435539 HMGXB3Q12766 1538 aa14.54□□□□□ -0.08
AL441943.1-201ENST00000435539 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
AL441943.1-201ENST00000435539 WIZO95785 1651 aa14.51□□□□□ -0.09
AL441943.1-201ENST00000435539 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
AL441943.1-201ENST00000435539 OSCARQ8IYS5 282 aa14.47□□□□□ -0.09
AL441943.1-201ENST00000435539 ZNF692Q9BU19 519 aaPredicted RBP14.44□□□□□ -0.1
AL441943.1-201ENST00000435539 VASPP50552 380 aaPredicted RBP14.43□□□□□ -0.1
AL441943.1-201ENST00000435539 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
AL441943.1-201ENST00000435539 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
AL441943.1-201ENST00000435539 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
AL441943.1-201ENST00000435539 SSUH2Q9Y2M2 353 aa14.32□□□□□ -0.12
AL441943.1-201ENST00000435539 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
AL441943.1-201ENST00000435539 CADPSQ9ULU8 1353 aa14.22□□□□□ -0.13
AL441943.1-201ENST00000435539 IFNLR1Q8IU57 520 aaPredicted RBP14.22□□□□□ -0.13
AL441943.1-201ENST00000435539 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
AL441943.1-201ENST00000435539 CFTRP13569 1480 aa14.18□□□□□ -0.14
AL441943.1-201ENST00000435539 LAMC3Q9Y6N6 1575 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms