Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ABCC10-203ENST00000372515 933 ntTSL 515.17■□□□□ 0.022e-6■■□□□ 12.7
PRPF8Q6P2Q9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.156e-7■■□□□ 12.7
PRPF8Q6P2Q9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.216e-7■■□□□ 12.7
PRPF8Q6P2Q9 NPM2-210ENST00000522813 565 ntAPPRIS ALT2 TSL 58.65□□□□□ -1.026e-7■■□□□ 12.7
PRPF8Q6P2Q9 PBX2-202ENST00000478678 1320 ntTSL 1 (best)19.12■□□□□ 0.656e-9■■□□□ 12.7
PRPF8Q6P2Q9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.216e-9■■□□□ 12.7
PRPF8Q6P2Q9 FAM193B-215ENST00000513282 651 ntTSL 312.82□□□□□ -0.368e-8■■□□□ 12.7
PRPF8Q6P2Q9 PNPLA2-203ENST00000526083 465 ntTSL 213.96□□□□□ -0.179e-9■■□□□ 12.7
PRPF8Q6P2Q9 MCF2L-216ENST00000439475 453 ntTSL 58.82□□□□□ -15e-7■■□□□ 12.7
PRPF8Q6P2Q9 CASC3-206ENST00000579238 517 ntTSL 27.53□□□□□ -1.23e-6■■□□□ 12.7
PRPF8Q6P2Q9 STAT6-218ENST00000555641 1804 ntTSL 513.79□□□□□ -0.24e-21■■□□□ 12.7
PRPF8Q6P2Q9 PIF1-207ENST00000559872 459 ntTSL 313.36□□□□□ -0.277e-8■■□□□ 12.7
PRPF8Q6P2Q9 PIF1-203ENST00000558380 673 ntTSL 313.28□□□□□ -0.287e-8■■□□□ 12.7
PRPF8Q6P2Q9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.373e-8■■□□□ 12.7
PRPF8Q6P2Q9 ITIH3-204ENST00000464804 543 ntTSL 413.97□□□□□ -0.175e-16■■□□□ 12.7
PRPF8Q6P2Q9 ENOSF1-217ENST00000584259 6340 ntTSL 26.91□□□□□ -1.32e-20■■□□□ 12.7
PRPF8Q6P2Q9 IRF9-210ENST00000560542 819 ntTSL 212.77□□□□□ -0.371e-7■■□□□ 12.7
PRPF8Q6P2Q9 C19orf70-202ENST00000585605 586 ntTSL 313.47□□□□□ -0.253e-6■■□□□ 12.7
PRPF8Q6P2Q9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.47□□□□□ -0.253e-6■■□□□ 12.7
PRPF8Q6P2Q9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.18□□□□□ -0.33e-6■■□□□ 12.7
PRPF8Q6P2Q9 POLE-212ENST00000539215 483 ntTSL 510.7□□□□□ -0.76e-8■■□□□ 12.7
PRPF8Q6P2Q9 PPIF-203ENST00000472580 761 ntTSL 514.45□□□□□ -0.11e-7■■□□□ 12.7
PRPF8Q6P2Q9 PPIF-202ENST00000448165 821 ntTSL 213.32□□□□□ -0.281e-7■■□□□ 12.7
PRPF8Q6P2Q9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.281e-7■■□□□ 12.7
PRPF8Q6P2Q9 AC005329.1-202ENST00000585596 571 ntTSL 413.07□□□□□ -0.321e-6■■□□□ 12.7
PRPF8Q6P2Q9 AC005329.1-203ENST00000589734 574 ntTSL 211.49□□□□□ -0.571e-6■■□□□ 12.7
PRPF8Q6P2Q9 PABPC1L-210ENST00000474208 308 ntTSL 510.89□□□□□ -0.671e-12■■□□□ 12.7
PRPF8Q6P2Q9 ATP5A1-213ENST00000590406 756 ntTSL 316.75■□□□□ 0.272e-8■■□□□ 12.7
PRPF8Q6P2Q9 ATP5A1-212ENST00000590324 807 ntTSL 58.43□□□□□ -1.062e-8■■□□□ 12.7
PRPF8Q6P2Q9 SMAD4-217ENST00000611848 1648 ntTSL 57.45□□□□□ -1.221e-7■■□□□ 12.7
PRPF8Q6P2Q9 SMAD4-212ENST00000591126 4970 ntTSL 1 (best)4.76□□□□□ -1.651e-7■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.24■□□□□ 0.195e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-213ENST00000471793 1779 ntTSL 215.58■□□□□ 0.085e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.04□□□□□ -0.325e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.06□□□□□ -0.645e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.97□□□□□ -0.655e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC10.95□□□□□ -0.665e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC10.84□□□□□ -0.675e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.63□□□□□ -0.715e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.48□□□□□ -0.735e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC10.43□□□□□ -0.745e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.015e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC8.34□□□□□ -1.085e-8■■□□□ 12.7
PRPF8Q6P2Q9 IKZF1-208ENST00000426121 201 ntTSL 1 (best)5.74□□□□□ -1.495e-8■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-214ENST00000569441 1428 ntTSL 525.49■■□□□ 1.672e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-212ENST00000568689 1998 ntTSL 323.56■■□□□ 1.362e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-208ENST00000566199 719 ntTSL 322.67■■□□□ 1.222e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.072e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.57■■□□□ 1.042e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-209ENST00000567120 2205 ntTSL 1 (best)21.37■■□□□ 1.012e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-213ENST00000569396 729 ntTSL 520.27■□□□□ 0.842e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.762e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-210ENST00000567901 785 ntTSL 318.78■□□□□ 0.62e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-207ENST00000565302 1975 ntTSL 317.45■□□□□ 0.382e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-204ENST00000563088 1067 ntTSL 316■□□□□ 0.152e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.482e-22■■□□□ 12.7
PRPF8Q6P2Q9 JMJD8-215ENST00000570037 870 ntTSL 310.27□□□□□ -0.772e-22■■□□□ 12.7
PRPF8Q6P2Q9 BAIAP2-223ENST00000575958 567 ntTSL 49.81□□□□□ -0.843e-7■■□□□ 12.7
PRPF8Q6P2Q9 BAIAP2-213ENST00000573659 578 ntTSL 48.74□□□□□ -1.013e-7■■□□□ 12.7
PRPF8Q6P2Q9 ACTB-202ENST00000414620 561 ntTSL 413.4□□□□□ -0.263e-15■■□□□ 12.7
PRPF8Q6P2Q9 ACTB-206ENST00000443528 569 ntTSL 413.18□□□□□ -0.33e-15■■□□□ 12.7
PRPF8Q6P2Q9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.8□□□□□ -0.26e-11■■□□□ 12.7
PRPF8Q6P2Q9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.246e-11■■□□□ 12.7
PRPF8Q6P2Q9 GUSB-213ENST00000479038 452 ntTSL 314.32□□□□□ -0.122e-15■■□□□ 12.7
PRPF8Q6P2Q9 GUSB-210ENST00000475316 505 ntTSL 37.8□□□□□ -1.162e-15■■□□□ 12.7
PRPF8Q6P2Q9 CHRD-203ENST00000356534 1252 ntTSL 1 (best)17.51■□□□□ 0.392e-7■■□□□ 12.7
PRPF8Q6P2Q9 GALT-204ENST00000468099 551 ntTSL 48.7□□□□□ -1.024e-7■■□□□ 12.7
PRPF8Q6P2Q9 REPIN1-206ENST00000469309 910 ntTSL 221.33■■□□□ 18e-7■■□□□ 12.7
PRPF8Q6P2Q9 REPIN1-215ENST00000495535 672 ntTSL 319.64■□□□□ 0.738e-7■■□□□ 12.7
PRPF8Q6P2Q9 REPIN1-207ENST00000473391 1064 ntTSL 217.94■□□□□ 0.468e-7■■□□□ 12.7
PRPF8Q6P2Q9 REPIN1-212ENST00000487455 464 ntTSL 48.6□□□□□ -1.038e-7■■□□□ 12.7
PRPF8Q6P2Q9 PGC-203ENST00000415707 399 ntTSL 56.63□□□□□ -1.354e-16■■□□□ 12.7
PRPF8Q6P2Q9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.6■□□□□ 0.257e-9■■□□□ 12.7
PRPF8Q6P2Q9 FTCD-210ENST00000488577 447 ntTSL 316.58■□□□□ 0.242e-28■■□□□ 12.7
PRPF8Q6P2Q9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.197e-9■■□□□ 12.7
PRPF8Q6P2Q9 TRIM15-208ENST00000433744 491 ntTSL 311.48□□□□□ -0.577e-9■■□□□ 12.7
PRPF8Q6P2Q9 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC10.66□□□□□ -0.77e-9■■□□□ 12.7
PRPF8Q6P2Q9 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.97□□□□□ -1.772e-7■■□□□ 12.7
PRPF8Q6P2Q9 ASPH-229ENST00000524173 587 ntTSL 42.23□□□□□ -2.052e-7■■□□□ 12.7
PRPF8Q6P2Q9 ASPH-216ENST00000519678 536 ntTSL 30.38□□□□□ -2.352e-7■■□□□ 12.7
PRPF8Q6P2Q9 SLC43A3-217ENST00000530005 1434 ntTSL 1 (best)16.49■□□□□ 0.231e-7■■□□□ 12.7
PRPF8Q6P2Q9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.511e-6■■□□□ 12.7
PRPF8Q6P2Q9 BCAM-208ENST00000590196 518 ntTSL 513.24□□□□□ -0.292e-10■■□□□ 12.7
PRPF8Q6P2Q9 BCAR1-213ENST00000563323 558 ntTSL 317.67■□□□□ 0.421e-6■■□□□ 12.7
PRPF8Q6P2Q9 ACCS-209ENST00000531940 1234 ntTSL 512.31□□□□□ -0.449e-7■■□□□ 12.7
PRPF8Q6P2Q9 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.929e-7■■□□□ 12.7
PRPF8Q6P2Q9 ACCS-204ENST00000527346 3373 ntTSL 26.99□□□□□ -1.299e-7■■□□□ 12.7
PRPF8Q6P2Q9 RAB17-205ENST00000411462 663 ntTSL 212.81□□□□□ -0.365e-13■■□□□ 12.7
PRPF8Q6P2Q9 RAB17-208ENST00000430445 421 ntTSL 512.19□□□□□ -0.465e-13■■□□□ 12.7
PRPF8Q6P2Q9 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.641e-6■■□□□ 12.7
PRPF8Q6P2Q9 ABCB6-207ENST00000485773 962 ntTSL 211.4□□□□□ -0.581e-6■■□□□ 12.7
PRPF8Q6P2Q9 FST-203ENST00000491717 640 ntTSL 28.56□□□□□ -1.041e-7■■□□□ 12.7
PRPF8Q6P2Q9 PNPLA2-204ENST00000529255 1301 ntTSL 1 (best)14.68□□□□□ -0.068e-9■■□□□ 12.7
PRPF8Q6P2Q9 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.783e-11■■□□□ 12.7
PRPF8Q6P2Q9 ABCC3-203ENST00000502426 5326 ntTSL 210.01□□□□□ -0.813e-11■■□□□ 12.7
PRPF8Q6P2Q9 ABCC3-207ENST00000505699 5271 ntTSL 29.88□□□□□ -0.833e-11■■□□□ 12.7
PRPF8Q6P2Q9 RPP21-225ENST00000466327 697 ntTSL 320.3■□□□□ 0.842e-7■■□□□ 12.7
PRPF8Q6P2Q9 RPP21-229ENST00000498414 1492 ntTSL 520.21■□□□□ 0.832e-7■■□□□ 12.7
PRPF8Q6P2Q9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.46■□□□□ 0.712e-7■■□□□ 12.7
PRPF8Q6P2Q9 RPP21-226ENST00000473266 621 ntTSL 518.15■□□□□ 0.52e-7■■□□□ 12.7
Retrieved 100 of 73,762 protein–RNA pairs in 510.6 ms