Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PSMB4-204ENST00000476467 2067 ntTSL 210.85□□□□□ -0.673e-7■■□□□ 12.8
PRPF8Q6P2Q9 AAMP-206ENST00000461911 567 ntTSL 29.95□□□□□ -0.821e-6■■□□□ 12.8
PRPF8Q6P2Q9 GAMT-204ENST00000640164 520 ntTSL 213.59□□□□□ -0.232e-8■■□□□ 12.8
PRPF8Q6P2Q9 GAMT-203ENST00000591788 401 ntTSL 56.09□□□□□ -1.432e-8■■□□□ 12.8
PRPF8Q6P2Q9 NME2-208ENST00000570801 565 ntTSL 211.26□□□□□ -0.613e-6■■□□□ 12.8
PRPF8Q6P2Q9 HDGFL2-202ENST00000589486 805 ntTSL 510.83□□□□□ -0.682e-8■■□□□ 12.8
PRPF8Q6P2Q9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.22■□□□□ 0.193e-7■■□□□ 12.8
PRPF8Q6P2Q9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.84□□□□□ -0.193e-7■■□□□ 12.8
PRPF8Q6P2Q9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.253e-7■■□□□ 12.8
PRPF8Q6P2Q9 PMF1-205ENST00000497069 837 ntTSL 313.05□□□□□ -0.323e-7■■□□□ 12.8
PRPF8Q6P2Q9 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.523e-7■■□□□ 12.8
PRPF8Q6P2Q9 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC11.03□□□□□ -0.643e-7■■□□□ 12.8
PRPF8Q6P2Q9 PMF1-201ENST00000368273 884 ntTSL 2 BASIC10.96□□□□□ -0.653e-7■■□□□ 12.8
PRPF8Q6P2Q9 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC10.38□□□□□ -0.753e-7■■□□□ 12.8
PRPF8Q6P2Q9 SF3B2-208ENST00000529994 1004 ntTSL 210.19□□□□□ -0.789e-9■■□□□ 12.8
PRPF8Q6P2Q9 GLDC-217ENST00000639840 600 ntTSL 514.25□□□□□ -0.132e-9■■□□□ 12.8
PRPF8Q6P2Q9 HMOX1-202ENST00000412893 921 ntTSL 317.22■□□□□ 0.355e-7■■□□□ 12.8
PRPF8Q6P2Q9 HMOX1-203ENST00000481190 582 ntTSL 314.79□□□□□ -0.045e-7■■□□□ 12.8
PRPF8Q6P2Q9 SDCCAG3-206ENST00000446833 459 ntTSL 315.09■□□□□ 0.011e-6■■□□□ 12.8
PRPF8Q6P2Q9 EIF2AK1-203ENST00000431744 806 ntTSL 322.02■■□□□ 1.128e-7■■□□□ 12.8
PRPF8Q6P2Q9 EIF2AK1-206ENST00000463213 791 ntTSL 214.01□□□□□ -0.178e-7■■□□□ 12.8
PRPF8Q6P2Q9 SH2D4A-201ENST00000265807 3352 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.973e-6■■□□□ 12.8
PRPF8Q6P2Q9 SH2D4A-202ENST00000518040 1697 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.983e-6■■□□□ 12.8
PRPF8Q6P2Q9 SH2D4A-206ENST00000523736 567 ntTSL 47.99□□□□□ -1.133e-6■■□□□ 12.8
PRPF8Q6P2Q9 SH2D4A-204ENST00000519207 1984 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.23e-6■■□□□ 12.8
PRPF8Q6P2Q9 OSBPL7-209ENST00000584698 688 ntTSL 28.54□□□□□ -1.044e-8■■□□□ 12.8
PRPF8Q6P2Q9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.42■□□□□ 0.381e-8■■□□□ 12.8
PRPF8Q6P2Q9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.241e-8■■□□□ 12.8
PRPF8Q6P2Q9 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.55□□□□□ -0.561e-8■■□□□ 12.8
PRPF8Q6P2Q9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.389e-7■■□□□ 12.8
PRPF8Q6P2Q9 PRCC-206ENST00000491853 833 ntTSL 310.91□□□□□ -0.669e-7■■□□□ 12.8
PRPF8Q6P2Q9 TRAM1-202ENST00000518678 535 ntTSL 414.61□□□□□ -0.075e-7■■□□□ 12.8
PRPF8Q6P2Q9 TRAM1-203ENST00000520700 542 ntTSL 514.44□□□□□ -0.15e-7■■□□□ 12.8
PRPF8Q6P2Q9 OSBPL7-205ENST00000580140 1594 ntTSL 215.48■□□□□ 0.073e-8■■□□□ 12.8
PRPF8Q6P2Q9 SF3B1-208ENST00000470268 2003 ntTSL 23.78□□□□□ -1.82e-10■■□□□ 12.8
PRPF8Q6P2Q9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.65■■□□□ 1.062e-8■■□□□ 12.8
PRPF8Q6P2Q9 POLR3H-207ENST00000432789 1598 ntTSL 221.17■□□□□ 0.982e-8■■□□□ 12.8
PRPF8Q6P2Q9 POLR3H-206ENST00000431534 1464 ntTSL 517.13■□□□□ 0.332e-8■■□□□ 12.8
PRPF8Q6P2Q9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.332e-8■■□□□ 12.8
PRPF8Q6P2Q9 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.612e-8■■□□□ 12.8
PRPF8Q6P2Q9 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.792e-8■■□□□ 12.8
PRPF8Q6P2Q9 BAIAP2-228ENST00000576756 748 ntTSL 215.77■□□□□ 0.127e-7■■□□□ 12.8
PRPF8Q6P2Q9 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.916e-7■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-204ENST00000586284 851 ntTSL 320.93■□□□□ 0.948e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-223ENST00000592808 1114 ntTSL 220.9■□□□□ 0.948e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-210ENST00000589134 890 ntTSL 219.73■□□□□ 0.758e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.698e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-224ENST00000593143 585 ntTSL 315.95■□□□□ 0.148e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-212ENST00000589400 1097 ntTSL 515.66■□□□□ 0.18e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-220ENST00000592079 965 ntTSL 514.68□□□□□ -0.068e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-216ENST00000590839 801 ntTSL 313.76□□□□□ -0.218e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-222ENST00000592512 403 ntTSL 213.29□□□□□ -0.288e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.04□□□□□ -0.328e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-215ENST00000589965 873 ntTSL 512.89□□□□□ -0.358e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-206ENST00000586719 729 ntTSL 512.15□□□□□ -0.468e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-218ENST00000591641 594 ntTSL 211.71□□□□□ -0.538e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-217ENST00000591251 973 ntTSL 310.73□□□□□ -0.698e-10■■□□□ 12.8
PRPF8Q6P2Q9 HOOK2-207ENST00000587178 748 ntTSL 310.5□□□□□ -0.738e-10■■□□□ 12.8
PRPF8Q6P2Q9 TTC13-208ENST00000522399 529 ntTSL 421.4■■□□□ 1.024e-6■■□□□ 12.8
PRPF8Q6P2Q9 TTC13-203ENST00000466507 865 ntTSL 521.39■■□□□ 1.024e-6■■□□□ 12.8
PRPF8Q6P2Q9 RELA-223ENST00000534283 575 ntTSL 520.79■□□□□ 0.923e-8■■□□□ 12.8
PRPF8Q6P2Q9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.95■□□□□ 0.466e-8■■□□□ 12.8
PRPF8Q6P2Q9 PAK4-204ENST00000593480 714 ntTSL 316.99■□□□□ 0.316e-6■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.272e-8■■□□□ 12.8
PRPF8Q6P2Q9 MAP2K5-209ENST00000558392 1506 ntTSL 516.48■□□□□ 0.236e-6■■□□□ 12.8
PRPF8Q6P2Q9 PAK4-210ENST00000599657 534 ntTSL 416.26■□□□□ 0.196e-6■■□□□ 12.8
PRPF8Q6P2Q9 PAK4-212ENST00000602004 564 ntTSL 416.24■□□□□ 0.196e-6■■□□□ 12.8
PRPF8Q6P2Q9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.11■□□□□ 0.176e-6■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-220ENST00000515508 563 ntTSL 216.09■□□□□ 0.172e-8■■□□□ 12.8
PRPF8Q6P2Q9 KCNN4-207ENST00000600909 1190 ntTSL 315.99■□□□□ 0.156e-6■■□□□ 12.8
PRPF8Q6P2Q9 KCNN4-203ENST00000598836 1003 ntTSL 515.94■□□□□ 0.146e-6■■□□□ 12.8
PRPF8Q6P2Q9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.71■□□□□ 0.116e-6■■□□□ 12.8
PRPF8Q6P2Q9 PCGF1-207ENST00000496911 837 ntTSL 215.36■□□□□ 0.056e-6■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-210ENST00000506399 918 ntTSL 514.6□□□□□ -0.072e-8■■□□□ 12.8
PRPF8Q6P2Q9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.42□□□□□ -0.16e-6■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.07□□□□□ -0.161e-6■■□□□ 12.8
PRPF8Q6P2Q9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.87□□□□□ -0.196e-6■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.222e-8■■□□□ 12.8
PRPF8Q6P2Q9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.64□□□□□ -0.236e-6■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-207ENST00000529663 967 ntTSL 1 (best)13.58□□□□□ -0.231e-6■■□□□ 12.8
PRPF8Q6P2Q9 GCDH-211ENST00000590472 545 ntTSL 513.57□□□□□ -0.244e-6■■□□□ 12.8
PRPF8Q6P2Q9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.27□□□□□ -0.296e-6■■□□□ 12.8
PRPF8Q6P2Q9 MED28-204ENST00000506409 347 ntTSL 213.21□□□□□ -0.36e-8■■□□□ 12.8
PRPF8Q6P2Q9 JAK1-204ENST00000471473 645 ntTSL 313.06□□□□□ -0.322e-6■■□□□ 12.8
PRPF8Q6P2Q9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.336e-6■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-214ENST00000509079 1134 ntTSL 512.94□□□□□ -0.342e-8■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.94□□□□□ -0.341e-6■■□□□ 12.8
PRPF8Q6P2Q9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.366e-6■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-209ENST00000505581 984 ntTSL 512.61□□□□□ -0.392e-8■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.421e-6■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-218ENST00000513080 575 ntTSL 412.33□□□□□ -0.442e-8■■□□□ 12.8
PRPF8Q6P2Q9 MGAT4B-218ENST00000521855 593 ntTSL 212.25□□□□□ -0.456e-6■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-211ENST00000531547 980 ntTSL 212.11□□□□□ -0.471e-6■■□□□ 12.8
PRPF8Q6P2Q9 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.03□□□□□ -0.486e-6■■□□□ 12.8
PRPF8Q6P2Q9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.496e-6■■□□□ 12.8
PRPF8Q6P2Q9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.496e-6■■□□□ 12.8
PRPF8Q6P2Q9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.56e-6■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-210ENST00000531004 1457 ntTSL 211.83□□□□□ -0.521e-6■■□□□ 12.8
PRPF8Q6P2Q9 SPOP-212ENST00000507970 919 ntTSL 511.75□□□□□ -0.532e-8■■□□□ 12.8
PRPF8Q6P2Q9 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.73□□□□□ -0.531e-6■■□□□ 12.8
Retrieved 100 of 73,762 protein–RNA pairs in 728.1 ms